EY679655

Overview
NameEY679655
Unique NameEY679655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679655 vs. ExPASy Swiss-Prot
Match: ASHH2_ARATH (Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.009e-16
Identity = 64/151 (42.38%), Postives = 80/151 (52.98%), Query Frame = 2 
Query:  119 ILRKLLKVLEYLAVREILTRNHITAGPPCPGMESFRGSILSLTEHDDKQVHQIARSFRDRWIPKPFRKHSYKDRDDSGMDIHRVANCNRLPMLHNHRRD-ESLRPSEAIDCVMQSLVAKTSVDTAANEVGSSPGAGGCQTNGPKVRKRKSR 568
            IL  LLK      + +I+ +N      P  GMESF+ S+LS TEHDD  VH IARSFRDRWIPK FRK    +R++    +    N  R       R D +S RP+E    V  S  A T    + +E  S P +G  +TNG   RKRKSR
Sbjct: 1426 ILDALLKTKSKSVLVDIINKNG-----PFAGMESFKDSVLSFTEHDDYTVHNIARSFRDRWIPKHFRKPWRINREERSESMRSPIN-RRFRASQEPRYDHQSPRPAEPAASVTSSKAA-TPETASVSEGYSEPNSGLPETNG---RKRKSR 1566
The following BLAST results are available for this feature:
BLAST of EY679655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASHH2_ARATH1.009e-1642.38Histone-lysine N-methyltransferase ASHH2 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-E12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679655 ID=EY679655; Name=EY679655; organism=Citrus sinensis; type=EST; length=964bp
AAATTATTTTAACTGCACTTCTGACTGCTAGAAAGACTGATAATTGCTCT
GCTTTCCAGGTTTACAGATGCTACACAACATGATCAAGCAGTACAGAAGG
GACTTCAAGAAGATTCCAATTCTTCGGAAGCTTCTGAAGGTCTTGGAATA
TTTGGCAGTGAGAGAGATACTTACACGGAATCATATTACTGCTGGTCCTC
CTTGTCCTGGGATGGAGAGCTTTCGGGGATCAATATTGTCATTGACAGAG
CATGATGACAAACAGGTTCATCAAATTGCACGTAGCTTCCGAGATAGATG
GATTCCTAAACCTTTCAGAAAACATAGCTACAAGGACAGGGATGATAGTG
GAATGGATATTCACAGGGTTGCAAACTGCAACAGGCTCCCAATGTTGCAC
AATCATCGGCGTGATGAAAGTTTAAGACCTTCAGAAGCAATTGATTGTGT
CATGCAGTCATTGGTTGCAAAAACTTCTGTGGATACTGCTGCCAATGAGG
TTGGCTCTTCCCCTGGTGCAGGAGGGTGCCAGACCAATGGCCCCAAAGTT
CGTAAACGTAAAAGTCGAATGGGATCCGCCCTGCTGAGACCAACCCTAAT
CCAATCAAGCACAAGAAATTGATGCTCGAGTCGAGGGGTGTTACCGAGAA
GAGAGGAAATTAATTGTCCTGGATCAATTCCCAATCCACTGTAAACAAAG
ATGAAGCGTGTTGCTTCCAAAAATGGGGGGAAAAATCACCCCAGAGGGAT
GTTCCCCCCGGGTTTTTCATCTCCGTTTTACCCCGCCCCCGGGTTCCCAC
CAATATCTCCACCAACAACTGGCCCCGGTTCCACAAAAATTGGTTCCACA
CGTCAGAAAGGGGCATTTGAAGGGGGGCATATCGCGAACCCCCACGGGGA
AAAACTAACATTCCCCCACCCACCCGGGCGGTCTTGGGGGAAATTCCCAT
GTCCGAAATTTTTT
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