EY679653

Overview
NameEY679653
Unique NameEY679653
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1029
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679653 vs. ExPASy Swiss-Prot
Match: Y1223_SYNY3 (Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC 6803) GN=slr1223 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.591e-22
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 1
Query:  223 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVM-IAEEP----QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYY 600
            M + +TGATGF+G  LV  L    H++ +L RS SKA+ +F PG     FP +  IA E      W+  + G  AV+NLAG PI  RW+   K EI +SR   T K+V+ I ++    +P V++S +A+GYY
Sbjct:    1 MKIILTGATGFVGCSLVPLLHQQGHELTLLVRSVSKAQRLFAPGS----FPQLKAIAYEATKSGDWQKVVDGQDAVINLAGEPISERWTEAYKAEIFDSRKLGTEKLVEAIAKADR--KPQVMISGSAIGYY 126          

HSP 2 Score: 39.6614 bits (91), Expect = 3.591e-22
Identity = 33/82 (40.24%), Postives = 41/82 (50.00%), Query Frame = 3
Query:  612 FSGTSETEIFEESTPSRNDYLAGRSGKKWEGTAPQVKKGCKNYHFIPLGIVLG*KMGGAFT*KKSPPLPESLGGGTPRGLGE 857
            + GTSET  F ES+   +D+LA    + WE  A QV++         +GIVLG   GGA   K  PP    L  G P G GE
Sbjct:  125 YYGTSETATFTESSKPGDDFLA-EVCQAWENAAHQVEQLGVRLVVFRIGIVLG-ADGGALA-KMLPPF--KLFAGGPLGSGE 201          
BLAST of EY679653 vs. ExPASy Swiss-Prot
Match: YFCH_ECOLI (Epimerase family protein yfcH OS=Escherichia coli (strain K12) GN=yfcH PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.470e-16
Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 1
Query:  223 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYY 600
            M + +TG TG IGR L+ RL    HQ+ V+TR+  KA  +  G +   + G  +A++      + G  AV+NLAG PI   RW+ E K+ + +SR  +T K+VDLIN S     PSVL+S +A GYY
Sbjct:    1 MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN----LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS--DTPPSVLISGSATGYY 118          
The following BLAST results are available for this feature:
BLAST of EY679653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1223_SYNY33.591e-2240.91Epimerase family protein slr1223 OS=Synechocystis ... [more]
YFCH_ECOLI2.470e-1641.73Epimerase family protein yfcH OS=Escherichia coli ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-E10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679653 ID=EY679653; Name=EY679653; organism=Citrus sinensis; type=EST; length=1029bp
ATCTTCATCACCGTCATTACCAAACGCACAGAGACAACAGAGAGAGTGAA
CACGCCACTTGAAAGCAGAATAATGGATGTGTTGTTGTGCCGAGCTAGTA
CATTGACATGGTCACAGTCCATATCTCCTTGTCTTCACAGTTCTGCTAAA
CCCTTTTCAAGGTGTGAAGCTAAGAAATTCAGAGTTTTTTGTACTTCTGA
TCATACCCAGAAGGCGAGTCAGATGACTGTATCAGTAACTGGAGCTACAG
GTTTCATAGGTAGAAGATTGGTGCAAAGATTGCAAGCAGATAATCATCAA
GTTCGTGTCCTGACACGCTCAAGATCTAAAGCCGAGTTAATATTTCCCGG
TAAGAAGACAAGGTTTTTTCCTGGAGTTATGATTGCGGAGGAGCCACAGT
GGAGAGACTGCATTCAAGGTTCAACTGCTGTTGTAAATTTGGCTGGAACG
CCCATAGGTACAAGATGGTCCTCTGAGATCAAGAAAGAGATCAAGGAAAG
CAGGATCAGAGTCACCTCAAAGGTTGTAGATTTAATTAATGAGTCACCAG
AAGGAGTTCGACCCTCTGTATTGGTCAGTGCAACAGCTCTTGGTTACTAT
GTTTTCTTCAATTCTCAGGAACTAGTGAAACCGAAATATTTGAAGAAAGC
ACCCCATCAAGAAATGATTACTTGGCTGGAAGGTCTGGAAAGAAATGGGA
GGGAACAGCCCCTCAAGTGAAAAAAGGATGTAAAAATTACCACTTTATTC
CCCTTGGCATTGTTCTTGGGTAAAAAATGGGGGGGGCTTTTACCTAAAAA
AAATCCCCTCCCCTTCCTGAAAGTTTGGGCGGGGGGACACCCCGGGGTCT
CGGGGAAAACAATGGGTTTTTCAGGGGATTTCACTTTGGGGTAGAAAAAT
AATGAAAACCGTAAAAAATTAAAAAACCCTCCTCTTCCAAATCCCAAACT
TTAATATCGGGGGGGTGTTCCATCAAAATGGTGCAACCTCGGCCCACCCA
AAAACACCCCCCTGTTTTTTTAGATATGG
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