EY679650

Overview
NameEY679650
Unique NameEY679650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1060
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679650 vs. ExPASy Swiss-Prot
Match: YIBL_AZOVI (Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region OS=Azotobacter vinelandii PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.575e-12
Identity = 55/150 (36.67%), Postives = 75/150 (50.00%), Query Frame = 2 
Query:  257 LRTFLAVAHHGSFSEAAEQVALTQAAVSFQMRSLEAELGRELFDRSGRLAILNAAGRELLPEIKHLLD-LYDRMRLPRTVPGELAGSVSVGSIVVLHGRAVQGGGGLDEIDPQAGNCAPGPARPSSW----ACKVKE*P---NCPPPSSW 682
            L  F+AVA  GSFSEA E++ LTQ AVS ++ +LE +L   LFDR GR   L  AGR LLP    +L  L D  R    + G+++G +++         A     GL  + P    CAP PA    W    A  +++ P   +C    SW
Sbjct:    6 LNAFIAVAETGSFSEAGERLHLTQPAVSKRIAALEQQLQVRLFDRLGREVRLTEAGRALLPRAYRILSVLEDTRRALNNLNGDVSGRLTL---------ATSHHIGLHRLPP---CCAPSPAPIRRWRWTSASSIRKWPTRRSCTAAPSW 143
The following BLAST results are available for this feature:
BLAST of EY679650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YIBL_AZOVI6.575e-1236.67Uncharacterized HTH-type transcriptional regulator... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-E06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679650 ID=EY679650; Name=EY679650; organism=Citrus sinensis; type=EST; length=1060bp
CGCGTTGCCGCCCTTGAGCAGCATGCGCACGGCCGGCCTGGGCCGCCAGC
GGGTGCGAGGTGGACACCACGTTGCGCGCGAACAGCGGGATGCGGATGGA
GGGATACGGGTTGACCCAGTCGAAGGATTTCATGGCGCCTGTCTCATATA
GGTAAGCAGGCGAAGGTACTCCCGTGATCTAATTAAATCAATTTGATTTT
TTGTTCAGTCATAAAAGAAATTTTTGTGAATTGACCCCATGAGCACCATC
CGATTCCTGCGCACTTTCCTGGCCGTCGCCCACCATGGTTCGTTCTCCGA
GGCGGCCGAGCAGGTGGCCCTGACGCAGGCCGCCGTCAGCTTCCAGATGC
GCTCGCTGGAGGCCGAGCTGGGCCGCGAACTGTTCGACCGCAGCGGACGG
CTGGCCATTCTCAACGCCGCTGGCCGGGAATTACTTCCGGAAATCAAGCA
CTTGCTGGATTTATACGACCGTATGCGGCTGCCGCGCACGGTGCCGGGCG
AGCTGGCCGGGTCGGTCTCGGTGGGCAGCATCGTGGTCCTGCATGGGCGC
GCTGTCCAAGGTGGTGGCGGGCTTGATGAAATCGACCCCCAAGCTGGGAA
CTGCGCTCCTGGTCCAGCTAGGCCGTCGAGCTGGGCCTGCAAAGTCAAGG
AATGACCTAATTGTCCTCCTCCTTCCAGTTGGTGGAGGACCGCTCGTTAA
CTCCCCCTTAGCGCTCACCTCTCAATGTATCACCACGTCCACGCTTTGTT
CAAGACTCAGCTGGAACTGGCGAACAAACTAAAGATCTGTTAAGATGACG
TTACCTACTTCTTCTTACTTCACGCAACCGGTCTCGTCTGCACGCTCTTG
ACCTCATCGACTCATCCTCTTCATCACACCATAATTGTTGCTGCTCTCTC
AACTGTGTGAGAGAAGAATGTAAGTGGCTTGGGCCTCCATGGCAGCCAGA
GAGCGCCACACGTGTGTCACCGCTAACGCGATAGTTATTCGGTGATCCCT
ATGCATGTAGACCAACACCAGAGTCCGTGCACGACACCTATGAGAAACCG
ACTTAGTAAC
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