EY744733

Overview
NameEY744733
Unique NameEY744733
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 81/126 (64.29%), Postives = 104/126 (82.54%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIK 403
            K+G + +N+HF+SFNTICDATQERQDAM+K+VE  +DL++V+GG+NSSNT+HLQEI+ +R IPSY IDS  RIGPGN++ +K +H  L  KENWLP G I +GITSGASTPDK V +VL K+F +K
Sbjct:  272 KYGPDQINQHFLSFNTICDATQERQDAMFKLVEYPLDLMVVIGGFNSSNTTHLQEISIEREIPSYHIDSADRIGPGNRVEHKPLHRPLEIKENWLPEGPIVVGITSGASTPDKVVSDVLEKIFALK 397          
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.753e-43
Identity = 83/126 (65.87%), Postives = 103/126 (81.75%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIK 403
            K+G + +NEHF+SFNTICDATQERQDAM  +V+E +DL++V+GG+NSSNT+HLQEIA + GIPSY IDS  RIGPGN+I +K +H      ENWLP+  ITIGITSGASTPDK VEEVL K+F ++
Sbjct:  271 KYGPDRLNEHFMSFNTICDATQERQDAMLSLVKEPLDLMVVIGGYNSSNTTHLQEIAIEHGIPSYHIDSADRIGPGNRIEHKPLHQNPTVAENWLPDRPITIGITSGASTPDKVVEEVLNKIFALR 396          
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.990e-43
Identity = 78/130 (60.00%), Postives = 106/130 (81.54%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIKREEA 415
            K+G   VNEHF+SFNTICDATQERQDA++++V+E +DL++V+GG+NSSNT+HLQEI+ D+ IPSY IDS  RIGPGN++ +K ++ +L   +NWLPNG + IG+TSGASTPDK V +++ K+F IK   A
Sbjct:  280 KYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEPLDLMVVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWLPNGPLAIGVTSGASTPDKVVSDIVEKIFSIKSASA 409          
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.905e-43
Identity = 79/127 (62.20%), Postives = 109/127 (85.83%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIKR 406
            K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L   E WLP G +TIGITSGASTPDK VE+V+ ++F+++R
Sbjct:  271 KYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397          
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.905e-43
Identity = 79/127 (62.20%), Postives = 109/127 (85.83%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIKR 406
            K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L   E WLP G +TIGITSGASTPDK VE+V+ ++F+++R
Sbjct:  271 KYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397          
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43
Identity = 81/131 (61.83%), Postives = 107/131 (81.68%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIKREEAL 418
            K+G   +NEHF+SFNTICDATQERQDAM  +VEE+VD+++V+GG+NSSNT+HLQEI+ ++GI SY IDS+KRI PGNKI +K +  ++  KENWLP+G+I +G+TSGASTPDK VE V+ ++FE K    L
Sbjct:  271 KYGPTELNEHFMSFNTICDATQERQDAMLNLVEEEVDVMVVIGGFNSSNTTHLQEISIEKGIDSYHIDSDKRILPGNKIEHKPLEKDIETKENWLPDGKIIVGVTSGASTPDKVVEAVIERIFEEKNAGVL 401          
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40
Identity = 78/129 (60.47%), Postives = 101/129 (78.29%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIKREE 412
            K+G   +N HF+SFNTICDATQERQDAM+ +VEE + L++V+GG+NSSNT+HLQEIA + GIPS  IDS  RIGPGN++ +K +  +L   E WLP G+IT+G+TSGASTPDK VEEV+ K+  IK  +
Sbjct:  244 KYGPIELNNHFMSFNTICDATQERQDAMFDLVEEDLSLMVVIGGFNSSNTTHLQEIAVEHGIPSVHIDSGDRIGPGNRVEHKPLGKDLEVLEPWLPAGKITVGVTSGASTPDKVVEEVMKKILAIKEAQ 372          
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP2 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ispH PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.278e-40
Identity = 77/130 (59.23%), Postives = 103/130 (79.23%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIKREEA 415
            KFG   +N+HF+SFNTICDATQERQDAM+ +VE+ +DL++V+GG+NSSNT+HLQEIA +R IPSY IDS  R+   N IA+K + GE+  + +WLP G++ IG+TSGASTPDK VE+V+ K+F  K + A
Sbjct:  271 KFGPTEINDHFMSFNTICDATQERQDAMFDLVEKDLDLMVVIGGFNSSNTTHLQEIAVERNIPSYHIDSGDRLLGNNVIAHKPLDGEITTQTHWLPAGKLKIGVTSGASTPDKVVEDVIAKIFAEKAQPA 400          
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.893e-40
Identity = 75/131 (57.25%), Postives = 105/131 (80.15%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIKREEAL 418
            K+G   +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID  +RI   N I ++ ++GELV  ENWLP G+I +G+TSGASTPDK VE+V+ K+F +K   A+
Sbjct:  271 KYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSVNSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATTAV 401          
BLAST of EY744733 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.003e-40
Identity = 75/131 (57.25%), Postives = 105/131 (80.15%), Query Frame = 2
Query:   26 KFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLTKVFEIKREEAL 418
            K+G   +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID  +RI   N I ++ ++GELV  ENWLP G+I +G+TSGASTPDK VE+V+ K+F +K   A+
Sbjct:  271 KYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSINSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATAAV 401          
The following BLAST results are available for this feature:
BLAST of EY744733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ISPH_CYAP41.028e-4364.294-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_THEEB1.753e-4365.874-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ACAM12.990e-4360.004-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNP63.905e-4362.204-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNE73.905e-4362.204-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAA58.700e-4361.834-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNY34.041e-4060.474-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNP25.278e-4059.234-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANAVT6.893e-4057.254-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANASP9.003e-4057.254-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-H11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744733 ID=EY744733; Name=EY744733; organism=Citrus sinensis; type=EST; length=844bp
CCACGCGTCCGGACCATGATGCGTAAAATTTGGGGTTGAAAATGTCAATG
AACACTTCATAAGCTTCAACACAATTTGTGATGCTACACAAGAGCGACAA
GATGCAATGTATAAGATGGTTGAGGAAAAGGTCGATCTTATCTTGGTTGT
TGGTGGGTGGAACTCGAGCAATACCTCACACCTTCAAGAGATTGCAGAAG
ACCGTGGAATTCCCTCATACTGGATCGATAGTGAGAAGAGAATAGGCCCC
GGAAACAAAATAGCATATAAATTGATGCATGGTGAGCTGGTGGAGAAAGA
AAATTGGCTGCCGAACGGCCAGATCACAATCGGTATAACATCCGGTGCCT
CCACCCCAGATAAGGCTGTTGAAGAGGTCCTTACAAAGGTATTCGAGATC
AAGCGTGAAGAAGCCTTGCAATTAGCGTAAACTGAGGTCCAAACATACAC
ATTATCAATAAATTTCGATGTGATTGTATCACTAGATATTGTAAAATTTA
TAACCCAGCCCCTCTGTCGGGTCTTTTATTATGGCCCTCTAATCTGAATT
TTATATTTTTTGGGTAAAAGGAAGACATCAAACCATCCCTTCACATCCAC
CCTCCCCCACCCCGTTCATCACCCCCGCAACCCGGAGGGGGGCGCCCTTT
TAAAGACCACCCCTTCCCTCCCCGTGCCTGCCACACTCTAACTTTTTCTA
ACGAGCCACAAAATACGGATTGACTGGCGAAAGTTTTTACGCGCCGCGGC
GGCGGGACAAACCCCCGTGCCTCCCCCAATTTTATGGCCTTGTCTCAGAC
CCCCCCCCTTTTCCCCAGGCGGGGTGGCATAAAACCCAAAAAGC
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