EY679627

Overview
NameEY679627
Unique NameEY679627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY679627_ssr345 microsatellite EY679627_ssr345:345..356. BLAST: Citrus ESTs to SwissProt
Csv1_Contig8617 contig Csv1_Contig8617:1..1004. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ECOL5 (Probable sugar efflux transporter OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=sotB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.322e-19
Identity = 65/223 (29.15%), Postives = 101/223 (45.29%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+PLG +  +   G RM F    +  +  LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+V  G   N+     +     ++    AL    A       ML   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPLGRIVGQY-FGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGMLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ERWT9 (Probable sugar efflux transporter OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sotB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.033e-19
Identity = 61/227 (26.87%), Postives = 102/227 (44.93%), Query Frame = -2
Query:   35 PWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 715
            P   + +A S++  G   A  LG+P+G +  +  LG R+ F V   V    +L  + L+P+L  E    +  +P LF  P      + + +   AH+ AY+Y+ PF ++ +G  G     LLL++G AG++G+V      N+     LL    +I  S       AT       L  +WG A         + +  +AP   +  M L   ++ + I  G+  GGQ+
Sbjct:  131 PQGKKTQALSMMATGTALAMVLGLPIGRMIGQL-LGWRITFAVIGAVAFVTMLLLLKLLPKLPSEHTGSLKSVPMLFRRPALVALYLLIAITVTAHYTAYSYIEPFIQSVAGLSGGFTTFLLLIFGAAGIVGSVLFSIYGNKFPATFLLAAIGLITLSMMCLYVSATHTLAVSTLCVIWGIAVMVMGLAVQVRVLALAPDATDVAMSLLSGIYNIGIGAGALLGGQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SHIFL (Probable sugar efflux transporter OS=Shigella flexneri GN=sotB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.961e-19
Identity = 66/224 (29.46%), Postives = 106/224 (47.32%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+PLG +  +   G RM F    +  +  LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+V  G   N+     +   +AL++     L P   + +   V+ I  WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPLGRIVGQY-FGWRMTFFAIGIGALVTLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSI-FWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SHIF8 (Probable sugar efflux transporter OS=Shigella flexneri serotype 5b (strain 8401) GN=sotB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.961e-19
Identity = 66/224 (29.46%), Postives = 106/224 (47.32%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+PLG +  +   G RM F    +  +  LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+V  G   N+     +   +AL++     L P   + +   V+ I  WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPLGRIVGQY-FGWRMTFFAIGIGALVTLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSI-FWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SHISS (Probable sugar efflux transporter OS=Shigella sonnei (strain Ss046) GN=sotB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.173e-19
Identity = 66/224 (29.46%), Postives = 106/224 (47.32%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+PLG +  +   G RM F    +  +  LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+V  G   N+     +   +AL++     L P   + +   V+ I  WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPLGRIVGQY-FGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSI-FWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SHIBS (Probable sugar efflux transporter OS=Shigella boydii serotype 4 (strain Sb227) GN=sotB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.173e-19
Identity = 66/224 (29.46%), Postives = 106/224 (47.32%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+PLG +  +   G RM F    +  +  LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+V  G   N+     +   +AL++     L P   + +   V+ I  WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPLGRIVGQY-FGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSI-FWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SHIB3 (Probable sugar efflux transporter OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=sotB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.173e-19
Identity = 66/224 (29.46%), Postives = 106/224 (47.32%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+PLG +  +   G RM F    +  +  LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+V  G   N+     +   +AL++     L P   + +   V+ I  WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPLGRIVGQY-FGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSI-FWGIAMMLIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ECOUT (Probable sugar efflux transporter OS=Escherichia coli (strain UTI89 / UPEC) GN=sotB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.173e-19
Identity = 66/224 (29.46%), Postives = 106/224 (47.32%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+PLG +  +   G RM F    +  +  LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+V  G   N+     +   +AL++     L P   + +   V+ I  WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPLGRIVGQY-FGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSI-FWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ECOSM (Probable sugar efflux transporter OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sotB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.173e-19
Identity = 66/224 (29.46%), Postives = 106/224 (47.32%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+PLG +  +   G RM F    +  +  LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+V  G   N+     +   +AL++     L P   + +   V+ I  WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPLGRIVGQY-FGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASTLVSTAIALLLVCLALLLPAANSEIHLGVLSI-FWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ECOSE (Probable sugar efflux transporter OS=Escherichia coli (strain SE11) GN=sotB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.173e-19
Identity = 66/224 (29.46%), Postives = 106/224 (47.32%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+PLG +  +   G RM F    +  +  LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+V  G   N+     +   +AL++     L P   + +   V+ I  WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPLGRIVGQY-FGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSI-FWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
The following BLAST results are available for this feature:
BLAST of EY679627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
SOTB_ECOL52.322e-1929.15Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ERWT93.033e-1926.87Probable sugar efflux transporter OS=Erwinia tasma... [more]
SOTB_SHIFL3.961e-1929.46Probable sugar efflux transporter OS=Shigella flex... [more]
SOTB_SHIF83.961e-1929.46Probable sugar efflux transporter OS=Shigella flex... [more]
SOTB_SHISS5.173e-1929.46Probable sugar efflux transporter OS=Shigella sonn... [more]
SOTB_SHIBS5.173e-1929.46Probable sugar efflux transporter OS=Shigella boyd... [more]
SOTB_SHIB35.173e-1929.46Probable sugar efflux transporter OS=Shigella boyd... [more]
SOTB_ECOUT5.173e-1929.46Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECOSM5.173e-1929.46Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECOSE5.173e-1929.46Probable sugar efflux transporter OS=Escherichia c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-C07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679627 ID=EY679627; Name=EY679627; organism=Citrus sinensis; type=EST; length=1007bp
CCTGCGGGTCCNGGTCCCGGAATTCCGGGTCGACAATCTGCCCGCCAAAG
AACGAGCCCACGGCAATGATCACCTGGAACAACGCGACGAACAGCGGCAT
GCCACGTTCCACATCCTTGGGCGCCACCACAAACATCCAGATACTCGCGC
AGGCCGGGAAGGCGCCGAAGGCGAAGCCCCACAGTGCGATCAGCATCACG
GCGCCGCTCATGCCGGTGGCGAAGTAGGGGAACAGGGCAGTGCTGGTGCC
GATCATCAGGGCCACCAGCAGCAGGGTGTGGCGCACGCTGCGGTTGGCGG
CGAAGCCGGCGAAGACGTTGCCCATTACGCCGGCCACGCCGTAGAGCAGC
AGCAGCGAGCCAATGGTCGGGCCGTCGAAGCCGGAGCTGTTTTTGAAGAA
CGGGGCGACGTAGGTGTAGGCGGCAAAGTGCGCGAGGCCGATCAGCAGCA
CGGCGATCAAGCCGACCCGGGCTTGTGGGTTGATGAACAGGGCCGGCAGG
TCGCTGATGCGGATGGCTTTTTCCGGTTCGAGGCGCGGCACCAGGAACAT
CTGCGCCAGCAGTACCGGGATGCCCACCACCGCGGTGACAAGGAAAGGCA
TGCGCCCGCCCAATCAGGGCCGCTCATCCAGGTGGCCAAGGGGTATGCCG
AGGAAGGGGGCCCAGGGTCAGCCCATCAGGATGATTGAGGGGGCTTCACA
ACGCCCACGCCATGGGAAGCAGGGGGGCGCGACTAAAGAAACCCAGGGTA
AGGTCAACTTGGAGGAAAAAACTTAAACTTTTACAGTGGCCACCAAATTA
AAGTCAGGGGCCCCATTCTTCCCAGCTGCGGCGGGGGAAAACGCAGGCAG
TCCCCAAATGTATATGCCTTGGTGCGAAAATTCCCCTGTTTCTGCCAGCG
GGGGGATGAACGAAGGGAGGGCCGCCCCCTAGCGTGCGCCTGATAGGAAC
AAAGAGTGCACCACACACAAGAAAAAAAAAAAGGAAGTAAAACGCACGAA
GAAAGAA
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