EY679624

Overview
NameEY679624
Unique NameEY679624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length998
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY679624_ssr17 microsatellite EY679624_ssr17:17..31. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 5.916e-84
Identity = 166/253 (65.61%), Postives = 193/253 (76.28%), Query Frame = 2
Query:   71 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGANETLPLSTYSRLV---GVEREKDYPLTLGTKGGFPGNLK--KGKLLAPGSKFQGYFPLKENQRGANL 814
            DD +IRQVV ++    EDHLLNAEHHF+ FKSKFSK+YAT+EEHDYRF VFK+NL +AK  Q  DPTA HG+TKFSDLT SEFRRQFLGL +RLRLPA AQKAPILPT +LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+LVSLSEQQLVDCDH CDPE++GSCDSGCNGG    L  + +  L+   GV +EKDY  T     G  G+ K  K K++A  S F     L E+Q  ANL
Sbjct:   26 DDFIIRQVVDNE----EDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGG----LMNNAFEYLLESGGVVQEKDYAYT-----GRDGSCKFDKSKVVASVSNF-SVVTLDEDQIAANL 264          
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 3.039e-80
Identity = 156/249 (62.65%), Postives = 183/249 (73.49%), Query Frame = 2
Query:   68 GDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGANETLPLSTYSRLVGVEREKDYPLTLGTKGGFPGNLKKGKLLAPGSKFQGYFPLKENQRGANL 814
            GDD +IRQVV      +E  +L +E HFSLFK KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+    +LP DA KAPILPT +LP DFDWRDHGAVT VK+QG+CGSCWSFSATGALEGA+FL+TG+LVSLSEQQLVDCDHECDPEE+ SCDSGCNGG   +    T  +  G+ +E+DYP T   K G    L K K++A  S F     + E Q  ANL
Sbjct:   28 GDDLVIRQVVGG----AEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTL-KTGGLMKEEDYPYT--GKDGKTCKLDKSKIVASVSNF-SVISIDEEQIAANL 268          
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 287.73 bits (735), Expect = 7.005e-77
Identity = 151/248 (60.89%), Postives = 182/248 (73.39%), Query Frame = 2
Query:   71 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGANETLPLSTYSRLVGVEREKDYPLTLGTKGGFPGNLKKGKLLAPGSKFQGYFPLKENQRGANL 814
            +D +IRQVV    +++E  +L++E HF+LFK KF K Y + EEH YRF VFKANL RA R Q +DP+A HGVT+FSDLT SEFRR+ LG+    +LP DA +APILPT +LP +FDWRD GAVT VK+QG+CGSCWSFS TGALEGAHFL+TG+LVSLSEQQLVDCDHECDPEE GSCDSGCNGG   +    T  +  G+ REKDYP T GT GG    L + K++A  S F     + E+Q  ANL
Sbjct:   26 EDVLIRQVV----DETEPKVLSSEDHFTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTL-KTGGLMREKDYPYT-GTDGG-SCKLDRSKIVASVSNF-SVVSINEDQIAANL 265          
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.862e-70
Identity = 145/255 (56.86%), Postives = 169/255 (66.27%), Query Frame = 2
Query:   71 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGANETLPLSTYSRLVGVEREKDYPLTLGTKGGFPGNLK--KGKLLAPGSKFQGYFPLKENQRGANL 814
            +D +IRQVVP  G    D  LNAE HF  F  +F K+Y   +EH YR  VFK NLRRA+R QLLDP+A HGVTKFSDLTP+EFRR +LGL +  R     L   A +AP+LPT+ LP DFDWRDHGAV  VK+QG+CGSCWSFSA+GALEGAH+L+TG+L  LSEQQ VDCDHECD  E  SCDSGCNGG   T   S   +  G+E EKDYP T     G  G  K  K K++A    F     + E Q  ANL
Sbjct:   24 EDPLIRQVVP--GGDDNDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGL-MTTAFSYLQKAGGLESEKDYPYT-----GSDGKCKFDKSKIVASVQNF-SVVSVDEAQISANL 269          
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.436e-37
Identity = 95/234 (40.60%), Postives = 129/234 (55.13%), Query Frame = 2
Query:  131 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT---NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGANETLPLSTYSRLV---GVEREKDYPLTLGTKGGFPGNLKKGKLLAPGSKFQGYFPLKENQ 799
            L  +  F  F+ KF+K Y+  EE+  RF +FK+NL + +   L+          GV KF+DL+  EF+  +L  N+      D   A  L     N +PT FDWR  GAVT VK+QG CGSCWSFS TG +EG HF+S  +LVSLSEQ LVDCDHEC + E   +CD GCNGG    L  + Y+ ++   G++ E  YP T  T  G   N     +   G+K   +  + +N+
Sbjct:   23 LEEQSQFLEFQDKFNKKYS-HEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLN-NKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGG----LQPNAYNYIIKNGGIQTESSYPYTAET--GTQCNFNSANI---GAKISNFTMIPKNE 245          
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.081e-32
Identity = 83/186 (44.62%), Postives = 112/186 (60.22%), Query Frame = 2
Query:  149 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGANETLPLSTYS---RLVGVEREKDY 691
            F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKFSDLT  EF   +L  N  L+  +  + +P    NDL P ++DWR  GAVT VK+QG CGSCW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GG    LP + Y+    L G+E E DY
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGG----LPSNAYAAIKNLGGLETEDDY 335          
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.864e-32
Identity = 88/197 (44.67%), Postives = 112/197 (56.85%), Query Frame = 2
Query:  116 SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGANETLPLSTYS---RLVGVEREKDY 691
            S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR  +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGSCW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GG    LP + YS    L G+E E DY
Sbjct:  176 SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYL--NTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD---------KMDKACMGG----LPSNAYSAIKNLGGLETEDDY 357          
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.997e-31
Identity = 80/194 (41.24%), Postives = 113/194 (58.25%), Query Frame = 2
Query:  134 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGANETLPLSTYSRLV---GVEREKDYP 694
            N +  +  FK K+ K Y   E+ + RF +FK+N+ +A+  Q+ +  +A++GVT +SDLT  EF R  L  +    +P+     P       N++P +FDWR+ GAVT VK+QG CGSCW+FS TG +E   F  TG+L+SLSEQQLVDCD           D GCNGG    LP + Y  ++   G+  E +YP
Sbjct:   15 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTAS--WVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGG----LPSNAYESIIKMGGLMLEDNYP 192          
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.208e-30
Identity = 81/186 (43.55%), Postives = 99/186 (53.23%), Query Frame = 2
Query:  158 FKSKFSKTYATQEEHDYRFRVFKANLR----RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGANETLPLSTYSRLV---GVEREKDYP 694
            FK+KF K YA  EE  +R  VF   L+      +R    + T    +  FSDLT  E      G+ RR    +   K+   PT  +  D DWR+ GAVT VKDQG CGSCW+FSA  ALEGAHFL TG+LVSLSEQ LVDC        S   + GCNGG     P   Y  ++   G++ E  YP
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSA--PTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDC-------SSSYGNQGCNGG----WPYQAYQYIIANRGIDTESSYP 195          
BLAST of EY679624 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.096e-29
Identity = 71/188 (37.77%), Postives = 108/188 (57.45%), Query Frame = 2
Query:  140 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGANETLPLSTYSRLVGVEREKDYP 694
            +H F  F+ +F + Y +  E   R R+F+ NL+  +     +  +A +G+T+F+D+T SE++ +  GL +R    A    A ++P    +LP +FDWR   AVT VK+QG+CGSCW+FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGG  +         + G+E E +YP
Sbjct:  305 DHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDN-AYKAIKDIGGLEYEAEYP 481          
The following BLAST results are available for this feature:
BLAST of EY679624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
CYSP_PEA5.916e-8465.61Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
RD19A_ARATH3.039e-8062.65Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH7.005e-7760.89Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_MAIZE4.862e-7056.86Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP1_DICDI2.436e-3740.60Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATF_MOUSE3.081e-3244.62Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATF_HUMAN6.864e-3244.67Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATL_SCHMA1.997e-3141.24Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CRUST_PANBO2.208e-3043.55Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CPR1_DROME1.096e-2937.77Putative cysteine proteinase CG12163 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-C04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679624 ID=EY679624; Name=EY679624; organism=Citrus sinensis; type=EST; length=998bp
CCGTATTCTCTCCTCTCTCCTCCTCCTCCTCCTATCTGCTGTGCTTGCGT
CCGCCGTAGCTGTCAGCGGCGACGATGCTATGATCAGACAGGTCGTGCCA
TCAGACGGCGAACAATCCGAAGATCATCTCCTGAACGCGGAGCACCACTT
CTCCCTCTTCAAGTCCAAATTCTCCAAGACTTACGCCACTCAGGAGGAGC
ACGATTACCGATTCCGCGTGTTCAAGGCTAACCTCCGCCGAGCAAAGCGA
CGCCAGCTCCTGGACCCCACTGCTGTCCACGGTGTCACCAAGTTCTCCGA
CTTAACGCCGTCTGAATTCCGCCGTCAGTTCCTTGGCTTGAATAGGCGGC
TTCGGCTACCAGCTGACGCTCAAAAGGCTCCTATCCTCCCTACCAACGAT
CTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCGTTACTGGCGTCAA
AGACCAGGGCGCATGTGGATCGTGCTGGTCGTTTAGTGCAACCGGCGCTT
TGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGTCAGCCTCAGTGAG
CAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAGAGGAATCTGGTTC
ATGTGACTCTGGGTGCAATGGTGGGGCTAATGAAACTCTGCCTTTGAGTA
CATACTCAAGGCTGGTGGGGGTTGAACGAGAGAAGGACTACCCTTTAACA
CTGGGGACCAAGGGTGGTTTCCCTGGCAATTTGAAAAAAGGAAAATTGCT
GGCACCGGGATCTAAATTTCAGGGTTATTTCCCCCTGAAGGAAAATCAAA
GGGGTGCAAATTTGGGGAAACCGGGCCCCCCGGGCGATGGGGATCCATGG
CGTTTGGGGATGGAAACCAAAAATTGGAAAGGAGTTTCCCGCCCCAAACA
TTTTTGGCGGGAAAATTATTTAGAATTCAGGGGGGAGGGCTTTTTGCGGG
GGGGCTTTAGGGACCCCTCCCAGAGGTGCTCTTCCCACCCCCCCAACC
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