EY679592

Overview
NameEY679592
Unique NameEY679592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679592 vs. ExPASy Swiss-Prot
Match: FLA11_ARATH (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 1.985e-56
Identity = 103/149 (69.13%), Postives = 120/149 (80.54%), Query Frame = 1
Query:   49 FMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQ-GLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGV 492
            F+F  L +  L    T  Q PA   SGP NITAILEK GQFT FIRLL++TQ  DQINTQLN+S+  GLTVFAPTDNAF +LKSGT+NSLSDQQKVQLVQFH+LPT ++  QFQT SNPLRTQAG+  +G+FPLN+T+SGNQVN+TTGV
Sbjct:    7 FIFSNLFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGV 155          

HSP 2 Score: 40.817 bits (94), Expect = 1.985e-56
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 2
Query:  506 VANTVFSGSNLAVYQVDQVLLPLELF 583
            VAN+V+S   LAVYQVDQVLLPL +F
Sbjct:  160 VANSVYSDKQLAVYQVDQVLLPLAMF 185          
BLAST of EY679592 vs. ExPASy Swiss-Prot
Match: FLA12_ARATH (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 4.549e-46
Identity = 84/148 (56.76%), Postives = 113/148 (76.35%), Query Frame = 1
Query:   49 FMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGV 492
            F   LLL +    +   +   A A  GP N+T ILEK GQFT FIRLL++T   +Q+  QLNNS+ G+T+FAP+D++F  LK+GT+NSL+D+Q+V+L+QFH++P+ +S+S FQT SNPLRTQAG+S DG FPLNVTTSGN VN+T+GV
Sbjct:   10 FTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGV 157          

HSP 2 Score: 33.8834 bits (76), Expect = 4.549e-46
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 2
Query:  506 VANTVFSGSNLAVYQVDQVLLPLELF 583
            V+  V+S   LAVYQVD+VLLP ++F
Sbjct:  162 VSGNVYSDGQLAVYQVDKVLLPQQVF 187          
BLAST of EY679592 vs. ExPASy Swiss-Prot
Match: FLA9_ARATH (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 7.713e-36
Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 1
Query:   61 LLLVSLLHCIKTSAQ--VPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNE 498
            LL+ ++L   K +AQ   PA   +GP N+TAILEKGGQFT+FI LL  TQ   Q+N Q+N+S++G+TVFAPTDNAF NLK GT+N LS   +V+L+ +H+ P   S     + SNP+RTQA   ++G + LN T   NQ+N++TG  E
Sbjct:   12 LLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVE 159          

HSP 2 Score: 27.335 bits (59), Expect = 7.713e-36
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 2
Query:  506 VANTVFSGSNLAVYQVDQVLLPLELF 583
            ++N++     LAVY VD VLLP E+F
Sbjct:  162 ISNSLRQQRPLAVYVVDMVLLPGEMF 187          
BLAST of EY679592 vs. ExPASy Swiss-Prot
Match: FLA13_ARATH (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.397e-34
Identity = 76/152 (50.00%), Postives = 101/152 (66.45%), Query Frame = 1
Query:   52 MFFLLLVSLLHCIKTSAQ--VPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQA-GNSNDGEFPLNVTTSGNQVNLTTGVNE 498
            +  LLL ++    + +AQ   PA   +GP NITAILEKGGQF + IRLL  TQ  +QIN Q+N+S++G+TV APTDNAF NLK GT+N LS   +V+L+ +H+ P   +     + SNP+RTQA G    G + LN T  GNQVN++TGV E
Sbjct:    6 LLLLLLTAVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVE 157          

HSP 2 Score: 26.1794 bits (56), Expect = 2.397e-34
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  536 LAVYQVDQVLLPLELF 583
            LAVY VD VLLP E+F
Sbjct:  170 LAVYVVDMVLLPEEMF 185          
BLAST of EY679592 vs. ExPASy Swiss-Prot
Match: FLA6_ARATH (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.585e-33
Identity = 74/155 (47.74%), Postives = 101/155 (65.16%), Query Frame = 1
Query:   43 FCFMFFLLLVSLLHCIKTSAQVPAAALSGPP-NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVT--TSGNQVNLTTGVNE 498
            F ++  L+ +  +  I++    PA      P N+TAILE G QFT+ I+LL  TQ   Q++ QLN+S+QG+T+FAPTDNAF  LK GT+NSL+ QQ++QL+ +HI+P   S S    ASNP+RTQA   + G F LN T     NQVN++TGV E
Sbjct:    6 FSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVE 160          

HSP 2 Score: 27.7202 bits (60), Expect = 2.585e-33
Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  536 LAVYQVDQVLLPLELFRITST 598
            LAVY VD VLLP ELF   +T
Sbjct:  173 LAVYVVDSVLLPEELFGTKTT 193          
BLAST of EY679592 vs. ExPASy Swiss-Prot
Match: FLA7_ARATH (Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.666e-15
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 1
Query:   58 FLLLVSLLHCIKTS--AQVPAAALSGPP---------NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQ--TASNPLRTQAGNSNDGEFPLNVTTSGNQVNL 480
            F+ +V+L+ C  ++  A  PA  L   P         N+T +L   G F +F+  L +T   +    Q NN+ +G+T+F P D+AF   K+  +++L+  Q  QLV FH LP   S S+F+  + S P+ T AG    G++ L  T     V +
Sbjct:    9 FIAVVALIVCSASAKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAG----GQYSLKFTDVSGTVRI 158          

HSP 2 Score: 30.4166 bits (67), Expect = 6.666e-15
Identity = 14/26 (53.85%), Postives = 21/26 (80.77%), Query Frame = 2
Query:  506 VANTVFSGSNLAVYQVDQVLLPLELF 583
            V+++VFS   +AVYQV++VLLP  +F
Sbjct:  167 VSSSVFSTDPVAVYQVNRVLLPEAIF 192          
BLAST of EY679592 vs. ExPASy Swiss-Prot
Match: FLA8_ARATH (Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.692e-12
Identity = 48/132 (36.36%), Postives = 70/132 (53.03%), Query Frame = 1
Query:   97 SAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGV 492
            +A  P+A+LS   NIT +LEK G  T F  LL ++     + T  +   +GLTVFAP+D AF       +  L+  + V L+++H L         +T  N + T A N   G+F L  +TSG++V L TGV
Sbjct:  179 TAPAPSASLS---NITGLLEKAGCKT-FANLLVSS---GVLKTYESAVEKGLTVFAPSDEAFKAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATN-GAGKFDLTTSTSGDEVILHTGV 302          

HSP 2 Score: 28.8758 bits (63), Expect = 2.692e-12
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 2
Query:  506 VANTVFSGSNLAVYQVDQVLLPLELF 583
            +A+TV   + + ++ VD VLLP ELF
Sbjct:  307 LADTVLDATPVVIFTVDNVLLPAELF 332          
BLAST of EY679592 vs. ExPASy Swiss-Prot
Match: FLA10_ARATH (Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.892e-12
Identity = 45/128 (35.16%), Postives = 68/128 (53.12%), Query Frame = 1
Query:  109 PAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGV 492
            PA + +G  NIT +LEK G  T F  LL ++     I T  +   +GLTVFAP+D AF       + +L+  + V L+++H L         +T  + + T A N   G++ L  +TSG++V L TGV
Sbjct:  181 PAPSSAGVSNITGLLEKAGCKT-FANLLVSS---GVIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATN-GAGKYDLTTSTSGDEVILHTGV 303          

HSP 2 Score: 28.1054 bits (61), Expect = 5.892e-12
Identity = 13/31 (41.94%), Postives = 21/31 (67.74%), Query Frame = 2
Query:  506 VANTVFSGSNLAVYQVDQVLLPLELFRITST 598
            +A+TV   + + ++ VD VLLP ELF  +S+
Sbjct:  308 LADTVVDETPVVIFTVDNVLLPAELFGKSSS 338          
The following BLAST results are available for this feature:
BLAST of EY679592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
FLA11_ARATH1.985e-5669.13Fasciclin-like arabinogalactan protein 11 OS=Arabi... [more]
FLA12_ARATH4.549e-4656.76Fasciclin-like arabinogalactan protein 12 OS=Arabi... [more]
FLA9_ARATH7.713e-3650.00Fasciclin-like arabinogalactan protein 9 OS=Arabid... [more]
FLA13_ARATH2.397e-3450.00Fasciclin-like arabinogalactan protein 13 OS=Arabi... [more]
FLA6_ARATH2.585e-3347.74Fasciclin-like arabinogalactan protein 6 OS=Arabid... [more]
FLA7_ARATH6.666e-1531.82Fasciclin-like arabinogalactan protein 7 OS=Arabid... [more]
FLA8_ARATH2.692e-1236.36Fasciclin-like arabinogalactan protein 8 OS=Arabid... [more]
FLA10_ARATH5.892e-1235.16Fasciclin-like arabinogalactan protein 10 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679592 ID=EY679592; Name=EY679592; organism=Citrus sinensis; type=EST; length=895bp
CAGTCTTAATAAAAGAACCTTGTTAACATAATGACAAAGCCATTTTGCTT
CATGTTCTTTCTTCTTCTTGTTTCCCTTCTTCATTGCATAAAAACTTCTG
CTCAAGTGCCTGCTGCAGCACTATCAGGCCCGCCAAACATCACTGCAATC
CTTGAAAAGGGTGGCCAATTTACTTCCTTCATTCGCCTGCTCGAAAACAC
CCAGCAAGATGACCAAATTAACACACAGCTCAATAACTCAAACCAGGGCC
TTACAGTATTTGCACCAACAGATAATGCTTTTGCTAATCTAAAATCAGGC
ACAATCAACTCACTGAGTGATCAGCAAAAGGTCCAGCTTGTGCAGTTCCA
TATTCTCCCTACTTCAATGTCCACATCACAATTCCAAACTGCTAGCAATC
CTCTGCGTACTCAGGCTGGAAATAGCAATGATGGTGAGTTCCCGCTTAAT
GTCACAACCTCAGGGAATCAAGTGAACTTAACAACTGGGGTTAACGAAAA
CAACAGTGGCTAACACTGTATTTAGTGGAAGCAATTTAGCTGTGTATCAA
GTTGATCAGGTGCTACTTCCACTGGAACTTTTTCGGATCACAAGCACCAG
CTCCAGCAACTTCCAACGCCAAAAAAGGATGTCCCCAGTTTGCTGCAAAC
TCCAAAAGGTCCTTCCACTGAACCCCTCAATTTGATACTTCCCCAAGCCC
TTGAATTTTAAAACCATCTTTGCACTCACAAATGGGATCCCTCTGGAAAA
TTCCACCTTTTTGCCGGTGGTTTCCTTTGTTAAAAATATTGTTTTCCTGG
GAAAGCAAAAAAAATTTTGGTTGGGGAATTTTGGGTTGAAAGACAAAAAA
ATTTTGAAATTTTGGTGAAAAAAACAAAAAAATTTTTATAAAAAA
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