EY679589

Overview
NameEY679589
Unique NameEY679589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679589 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.855e-16
Identity = 51/138 (36.96%), Postives = 74/138 (53.62%), Query Frame = 3
Query:   75 CPLDVIQLSSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGDHE 473
            CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG  + D  +  L + D+E
Sbjct:   69 CPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201          
BLAST of EY679589 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 3
Query:   45 SAHTSVSNGQCPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGD 467
            SA T      CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+      RR L + D
Sbjct:   66 SATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
The following BLAST results are available for this feature:
BLAST of EY679589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC5.855e-1636.9621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU7.646e-1634.90Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679589 ID=EY679589; Name=EY679589; organism=Citrus sinensis; type=EST; length=758bp
CCGGGAAATTTCCCGGGGGTCGACCCACGCGTCCGCCGGTGGATTCAGCA
CACACCTCCGTTTCAAATGGACAGTGTCCCTTGGACGTTATCCAATTAAG
TTCTCCTAGCGAAAGGGGAGATAATTTAAGATTACTTCCGTACGACAATT
ACAAAATTGTCAAGGTATCCACTGATGTCAACCTGAGATTCCCCGTAAAA
GTTTCTGTTAAGCCCTGTAATGAAGAACCATTGTGGAAAGTTGATAGCTA
TGACGATCCATTAATTGTAACCGGCGGAAGTGAGGGCCACCCAGGAGCTG
AAACGTTGCTAAATTGGTTTAAGATTGAGAAAGCTGGAAATTTTTCATAT
GGTGGTGTATACAATATTGTCCATTGTCCGAGTGTCTGTCTATCTTGTCC
TAGACGCTGCAACAAAATTGGCGTTTCAACTAAGGATGGCGTTCGACGTC
TGCTTCTAGTTGGTGATCATGAACCGGCTTTGAATGTTCTGTTTTTTCCA
TCAGAGGAAAGCTCAAGGCTACTTCAAGCTGCTAACGCAATATCAAGGTT
TTTTGAAGCTGCTGAAGCAATATCAATGACCGCGTAATGAATGAACTTAG
CTGTATCATTCTAAATAATAGACCAGGCTAGTAACCTTTTTATCTCTATT
ACAAAATAAAAATAACACCGCCTGTGATCCCAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAGGGGGGCCGCTCTAAAAGGATTCAAGCTTTAATTC
CGCGTGCT
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