EY679586

Overview
NameEY679586
Unique NameEY679586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679586 vs. ExPASy Swiss-Prot
Match: DAPA_TOBAC (Dihydrodipicolinate synthase, chloroplastic OS=Nicotiana tabacum GN=DHPS1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 9.087e-57
Identity = 125/196 (63.78%), Postives = 139/196 (70.92%), Query Frame = 3
Query:  132 SVSCTGKNRK---WRPPQAAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASIKVIGNNWKQLHQGSNSCY*TRFCKLECMQRYT*ILTME--------KTSLEGLISHFDRVLSRGPTIKKKGPPQTGSKKFPP 686
            S+   G  R+   WR P+AA+IP++HLPMRS EVKNRT A+DIKALRLITAIKTPYLPDGRFDLEAYD LVN+QI NGAEG+IVGGTTGEGQLMSWDEHIMLIGHTVNCFG SIKVIGN       GSNS   TR       Q +   +           KTSLEGLISHF+ VL  GPTI    P +TG +  PP
Sbjct:   15 SIEAAGTKRRTTRWRSPRAAVIPSFHLPMRSNEVKNRTFADDIKALRLITAIKTPYLPDGRFDLEAYDTLVNLQIENGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT------GSNS---TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFESVLPMGPTIIYNVPSRTG-QDIPP 200          
BLAST of EY679586 vs. ExPASy Swiss-Prot
Match: DAPA2_ARATH (Dihydrodipicolinate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=DHDPS2 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.644e-56
Identity = 121/197 (61.42%), Postives = 139/197 (70.56%), Query Frame = 3
Query:  120 CGPVSVSCTGKNRKWRPPQAAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASIKVIGNNWKQLHQGSNSCY*TRFCKLECMQRYT*ILTME--------KTSLEGLISHFDRVLSRGPTIKKKGPPQTGSKKFPP 686
            C  +  S   ++ KW  P+AA++PN+HLPMRS EVKNRT+ +DIKALR+ITAIKTPYLPDGRFDLEAYDDLVN+QI NGAEG+IVGGTTGEGQLMSWDEHIMLIGHTVNCFG SIKVIGN       GSNS   TR       Q +   +           KTS+EGLI+HF  VL  GPTI    P +TG +  PP
Sbjct:   20 CPKLFNSYKRRSSKWVSPKAAVVPNFHLPMRSLEVKNRTNTDDIKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT------GSNS---TREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNVPGRTG-QDIPP 206          
BLAST of EY679586 vs. ExPASy Swiss-Prot
Match: DAPA_SOYBN (Dihydrodipicolinate synthase, chloroplastic OS=Glycine max GN=DHPS1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.802e-52
Identity = 114/178 (64.04%), Postives = 128/178 (71.91%), Query Frame = 3
Query:  177 AAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASIKVIGNNWKQLHQGSNSCY*TRFCKLECMQRYT*ILTME--------KTSLEGLISHFDRVLSRGPTIKKKGPPQTGSKKFPP 686
            AA+ PN+HLPMRSFE+KNRTS EDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQI  GAEG+IVGGTTGEGQLMSW+EHI+LI HTVNCFG  IKVIGN       GSNS   TR       Q +   +           KTSL+G+++HF  VLS GPTI    P +TG +  PP
Sbjct:    6 AAVKPNFHLPMRSFELKNRTSPEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIGQGAEGVIVGGTTGEGQLMSWEEHIILIAHTVNCFGGKIKVIGNT------GSNS---TREAIHATEQGFAVGMHAALHINPYYGKTSLDGMVAHFRSVLSMGPTIIYNVPARTG-QDIPP 173          
BLAST of EY679586 vs. ExPASy Swiss-Prot
Match: DAPA1_ARATH (Dihydrodipicolinate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=DHDPS1 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 8.802e-52
Identity = 113/189 (59.79%), Postives = 131/189 (69.31%), Query Frame = 3
Query:  150 KNRKWRPPQAAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASIKVIGNNWKQLHQGSNSCY*TRFCKLECMQRYT*ILTME----------KTSLEGLISHFDRVLSRGPTIKKKGPPQTGSKKFPP 686
            +N KW  P AA++PN+HLPMRS E KNRT+ +DI++LR+ITAIKTPYLPDGRFDL+AYDDLVN QI NGAEG+IVGGTTGEGQLMSWDEHIMLIGHTVNCFG  IKVIGN       GSNS   TR       Q +   + M           KTS+EG+ +HF  VL  GPTI    P +T  +  PP
Sbjct:   30 RNAKWVSPIAAVVPNFHLPMRSLEDKNRTNTDDIRSLRVITAIKTPYLPDGRFDLQAYDDLVNTQIENGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGRIKVIGNT------GSNS---TREAIHATEQGFA--MGMHGALHINPYYGKTSIEGMNAHFQTVLHMGPTIIYNVPGRT-CQDIPP 206          
BLAST of EY679586 vs. ExPASy Swiss-Prot
Match: DAPA1_WHEAT (Dihydrodipicolinate synthase 1, chloroplastic OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.461e-48
Identity = 113/199 (56.78%), Postives = 128/199 (64.32%), Query Frame = 3
Query:  126 PVSVSCTGKNRKWRPPQAAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASIKVIGNNWKQLHQGSNSCY*TRFCKLECMQRYT*ILTME--------KTSLEGLISHFDRVLSRGPTIKKKGPPQTGSKKFPPACES 698
            PVS     +  K +   AA+  + +LPMRS EVKNRTS + IK+LRLITA+KTPYLPDGRFDLEAYD L+N QI  GAEG+IVGGTTGEG LMSWDEHIMLIGHTVNCFGA+IKVIGN       GSNS   TR       Q +   +           KTS EGLISHF  VL  GPTI    P +T     PP  E+
Sbjct:   45 PVSGHSASRVSKGKFAVAAVTLDDYLPMRSTEVKNRTSTDGIKSLRLITAVKTPYLPDGRFDLEAYDSLINTQINGGAEGVIVGGTTGEGHLMSWDEHIMLIGHTVNCFGANIKVIGNT------GSNS---TREAVHATEQGFAVGMHAALHVNPYYGKTSTEGLISHFKEVLPMGPTIIYNVPSRTSQDIPPPVIEA 234          
BLAST of EY679586 vs. ExPASy Swiss-Prot
Match: DAPA2_WHEAT (Dihydrodipicolinate synthase 2, chloroplastic OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.315e-47
Identity = 106/176 (60.23%), Postives = 117/176 (66.48%), Query Frame = 3
Query:  177 AAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASIKVIGNNWKQ-----LHQGSNSCY*TRFCKLECMQRYT*ILTMEKTSLEGLISHFDRVLSRGPTIKKKGPPQTGSKKFPPA 689
            AAI  + +LPMRS EVKNRTS + IK+LRLITA+KTPYLPDGRFDLEAYD L+N QI  GAEG+IVGGTTGEG LMSWDEHIMLIGHTVNCFG +IKVIGN         +H             L     Y       KTS  GLISHFD VL  GPTI    P +TG +  PPA
Sbjct:   51 AAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAVKTPYLPDGRFDLEAYDSLINTQINGGAEGVIVGGTTGEGHLMSWDEHIMLIGHTVNCFGTNIKVIGNTGSNSTREAIHASEQGFAVGMHAALHVNPYYG------KTSTAGLISHFDEVLPMGPTIIYNVPSRTG-QDIPPA 219          
BLAST of EY679586 vs. ExPASy Swiss-Prot
Match: DAPA_MAIZE (Dihydrodipicolinate synthase, chloroplastic OS=Zea mays PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.480e-46
Identity = 107/178 (60.11%), Postives = 122/178 (68.54%), Query Frame = 3
Query:  177 AAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASIKVIGNNWKQLHQGSNSCY*TRFCKLECMQRYT*ILTME--------KTSLEGLISHFDRVLSRGPTIKKKGPPQTGSKKFPP 686
            AAI  + +LPMRS EVKNRTS +DI  LRLITA+KTPYLPDGRFDLEAYD L+NMQI  GAEG+IVGGTTGEG LMSWDEHIMLIGHTVNCFG+ IKVIGN       GSNS   TR       Q +   +           KTS EG+ISHF+ VL  GPTI    P ++ ++  PP
Sbjct:   54 AAITLDDYLPMRSTEVKNRTSTDDITRLRLITAVKTPYLPDGRFDLEAYDSLINMQIEGGAEGVIVGGTTGEGHLMSWDEHIMLIGHTVNCFGSRIKVIGNT------GSNS---TREAVHATEQGFAVGMHAALHINPYYGKTSAEGMISHFEAVLPMGPTIIYNVPSRS-AQDIPP 221          
BLAST of EY679586 vs. ExPASy Swiss-Prot
Match: DAPA_COILA (Dihydrodipicolinate synthase, chloroplastic OS=Coix lachryma-jobi GN=DAPA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.240e-46
Identity = 106/178 (59.55%), Postives = 123/178 (69.10%), Query Frame = 3
Query:  177 AAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASIKVIGNNWKQLHQGSNSCY*TRFCKLECMQRYT*ILTME--------KTSLEGLISHFDRVLSRGPTIKKKGPPQTGSKKFPP 686
            +AI  + +LPMRS EVKNRTS +DI +LRLITA+KTPYLPDGRFDLEAYD L+NMQI  GAEG+IVGGTTGEG LMSWDEHIMLIGHTVNCFG+ IKVIGN       GSNS   TR       Q +   +           KTS EG+ISHF+ VL  GPTI    P ++ ++  PP
Sbjct:   51 SAITLDDYLPMRSTEVKNRTSTDDITSLRLITAVKTPYLPDGRFDLEAYDSLINMQIEGGAEGVIVGGTTGEGHLMSWDEHIMLIGHTVNCFGSRIKVIGNT------GSNS---TREAVHATEQGFAVGMHAALHINPYYGKTSTEGMISHFESVLPMGPTIIYNVPSRS-AQDIPP 218          
The following BLAST results are available for this feature:
BLAST of EY679586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
DAPA_TOBAC9.087e-5763.78Dihydrodipicolinate synthase, chloroplastic OS=Nic... [more]
DAPA2_ARATH2.644e-5661.42Dihydrodipicolinate synthase 2, chloroplastic OS=A... [more]
DAPA_SOYBN8.802e-5264.04Dihydrodipicolinate synthase, chloroplastic OS=Gly... [more]
DAPA1_ARATH8.802e-5259.79Dihydrodipicolinate synthase 1, chloroplastic OS=A... [more]
DAPA1_WHEAT3.461e-4856.78Dihydrodipicolinate synthase 1, chloroplastic OS=T... [more]
DAPA2_WHEAT1.315e-4760.23Dihydrodipicolinate synthase 2, chloroplastic OS=T... [more]
DAPA_MAIZE2.480e-4660.11Dihydrodipicolinate synthase, chloroplastic OS=Zea... [more]
DAPA_COILA3.240e-4659.55Dihydrodipicolinate synthase, chloroplastic OS=Coi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679586 ID=EY679586; Name=EY679586; organism=Citrus sinensis; type=EST; length=907bp
GACCGGGGTTCCGGAAATTCCGGGTCGAACCCGCGTCCGAGACTCGACTG
CCTAAAACTGAGAAGAAAAGGAAAGAGGAAATGGTTCACTTGAATGCGTG
CGAGTTGAACCTCAGTAACTGCGGACCCGTCTCTGTCTCTTGCACCGGGA
AAAACCGGAAATGGAGACCCCCTCAAGCAGCTATAATTCCCAATTACCAT
CTTCCAATGCGTAGTTTTGAGGTTAAAAACAGGACATCTGCAGAGGATAT
AAAGGCACTTAGATTGATAACTGCCATCAAAACGCCATATCTACCAGATG
GCAGATTTGATCTTGAAGCTTATGATGACCTAGTGAATATGCAGATCGTA
AATGGTGCTGAAGGTATGATTGTTGGTGGCACAACTGGTGAAGGCCAACT
CATGAGCTGGGATGAACATATAATGCTTATTGGTCACACAGTGAACTGCT
TTGGTGCCTCAATAAAGGTAATTGGAAATAACTGGAAGCAACTCCACCAG
GGAAGCAATTCTTGCTACTGAACAAGGTTTTGCAAGTTGGAATGCATGCA
GCGCTACACATAAATCCTTACTATGGAAAAAACTTCCTTGGAGGGCTTGA
TTTCTCACTTTGATAGGGTGTTGTCCAGGGGCCCCACCATTAAAAAAAAA
GGGCCGCCACAAACTGGGTCAAAAAAATTTCCTCCCGCGTGTGAATCACA
AAATGGGCACAAATTCCAGAAACCGGGTGGGGGGAAAGGAAAGGGTTGGG
AAAGAACCGGGTTAAAAAATTTAACGGGTAAGGGAAATGGGGGGGGGGAA
GGGAGAAAGAAAAACCAAAGGCATGAAAGCTAAGGGGGAAACCAGGGGGG
AACGGGGGGGGAAAAATCTGGTAAAAAAAAACCTTGGTTCCCCAGGGGAA
AAAAGAT
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