EY679580

Overview
NameEY679580
Unique NameEY679580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679580 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.483e-38
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 1
Query:   13 KAVQYVRPYRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 288
            KAVQYVR  RGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKEF+RAI +LSENNPLTG+KGEIRK CNLANK H
Sbjct:  239 KAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330          
BLAST of EY679580 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.733e-23
Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 1
Query:   16 AVQYVRPYRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 279
            AV Y R  R TPMV+DN YY+NI+ +KGL+++D +LATD RT P+V KMA   +YF ++FSR + LLSE NPLTG +GEIRK C   N
Sbjct:  240 AVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of EY679580 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 1
Query:   46 TPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 279
            TP   DN Y++NI    GL+  DH L +D RTRP+V+  A+ Q  FF +F+ A+  LS +  LTG +GEIR+ C+  N
Sbjct:  251 TPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of EY679580 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 1
Query:   46 TPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 279
            TP   DN YY+N+    GL+  DH L +D RTR +V   AK+QD FFK+F++A+  LS     TG +GEIR+ C+  N
Sbjct:  239 TPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
The following BLAST results are available for this feature:
BLAST of EY679580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PER42_ARATH1.483e-3884.78Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH8.733e-2357.95Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER63_ARATH1.545e-1144.87Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER31_ARATH1.545e-1146.15Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-G07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679580 ID=EY679580; Name=EY679580; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGCAAGGCTGTTCAGTATGTGAGGCCTTACCGTGGCACACC
CATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAGGGCT
TGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTAT
GTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAG
AGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTG
AGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAG
CTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATTTTTC
TTCCTTGTTTCTTCTATGAGGAAGAAAAGAGTGTGAGATGAGCTCCCAAT
AAGATGGTTTTTCTAGATCGGTTTGTTTCCTGTGAGATGTTCGTATTACT
GCTATTATGTTCCTTAGATGTACCGTCCAATGTTTAAGCCTAGGCTTTCC
TTTTCCTCGATGGTGTGAGCTTGATGTTATTAATATTCAATAATGGCAGT
GGTAGATGAGGGAATGTAATGTATGTACAAAAATTTATGAAAAATAGAGA
CGATATGATAAGAGCCCAGTATAAAAAATACACGTTGGGTGGGCGAGAAA
ACAGCGATGTGAGAGGTAAAGAGGGGGCCGGCCCCCCCAAAGAATTCCAG
GTTTAATAACGGGGGGGGGGAACGCCTAATCCTCTTTTAAAGGGGCCCCC
AAAATTAATTTCCGGGGGCCGCCCTTTTAAAACCTCGAGGAGGGGAAAAA
CCCCGGGGGGTTTCCCCCAATTTTTTCCCCCTTTGGCGCCTCCCCCCCCT
TTTCCCCCGGGGGGGGTGAAAAAACAAAAAAAAAGGCCCCCCCCCCCATA
ACTCCCCTTTCCCCCAAA
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