EY679576

Overview
NameEY679576
Unique NameEY679576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.662e-52
Identity = 92/147 (62.59%), Postives = 114/147 (77.55%), Query Frame = 1
Query:  100 ILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPTMETSVFT 540
            +  FETPE  DRDKF WFRDEEF+RQT+AG+NP SI+L+TE+P+KS LD   YGP +S IT E++E++I  +++ +EA++ KKLF+LDYHDL LPYV KVR+L  TTLYGSR +FFLT  GTLRPIAIELTRP    KP     VFT
Sbjct:  409 VFKFETPEIHDRDKFAWFRDEEFARQTIAGMNPMSIQLVTEFPIKSNLDEATYGPADSLITKEVVEEQIRRVMTADEAVQNKKLFMLDYHDLLLPYVHKVRKLDGTTLYGSRALFFLTADGTLRPIAIELTRPKSKKKPQWR-QVFT 554          

HSP 2 Score: 35.4242 bits (80), Expect = 7.662e-52
Identity = 17/45 (37.78%), Postives = 28/45 (62.22%), Query Frame = 2
Query:  515 PQWKQVFLP-FFGTLLSAGFWKLAQAHVLGS*CWLTPTLSTHWVK 646
            PQW+QVF P   G++  +  W+LA+AH+L     +   +S HW++
Sbjct:  547 PQWRQVFTPGCDGSVTGSWLWQLAKAHILAHDAGVHQLVS-HWLR 590          
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.608e-51
Identity = 98/160 (61.25%), Postives = 125/160 (78.12%), Query Frame = 1
Query:   91 GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPTMETSVFTFLWHSTECWL 570
            GD ILLF+TP  + +DKF W RDEEF+R+TLAG+NPY+I L+ E+PLKS LDP +YGP ESAIT +L+E+++  +++VEEAI QK+LF+LD+HDLFLPYV K+R LK TT+YGSRTIFFLT  GTLR +AIELTRP    +P     VFT    +T+ WL
Sbjct:  419 GDKILLFDTPANVQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEEAISQKRLFMLDFHDLFLPYVHKIRSLKHTTMYGSRTIFFLTDDGTLRLLAIELTRPASPSQPQWR-QVFTPSTDTTKSWL 577          
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.583e-51
Identity = 96/161 (59.63%), Postives = 124/161 (77.02%), Query Frame = 1
Query:   88 AGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPTMETSVFTFLWHSTECWL 570
            A D+IL F+ P  ++RD+F W RD+EF+RQTLAGLNPYSI+L+ EWPL S LDP +YG P S IT E++E+E+ G ++V+EA+K K+LF+LDYHDL LPYV KVR+L +TTLY SRT+FFL+   TLRP+AIELT PP   KP  +  VFT  + +T CWL
Sbjct:  374 AQDDILQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLITWEIVEREVKGNMTVDEALKNKRLFVLDYHDLLLPYVNKVRELNNTTLYASRTLFFLSDDSTLRPVAIELTCPPNINKPQWK-QVFTPGYDATSCWL 533          
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.152e-49
Identity = 93/159 (58.49%), Postives = 125/159 (78.62%), Query Frame = 1
Query:   94 DNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPTMETSVFTFLWHSTECWL 570
            +++L FE PE ++RD+F WFRDEEF+RQTLAGLNP  IR +TE+P+ S LDP +YGP ESA++ E++EK + G ++VEEA+++K+LF+LDYHD+FLPYV +VR+L  TTLYGSRT+FFL+  GTL P+AIELTRP    KP  + + FT    +TE WL
Sbjct:  378 EHVLRFEVPEMLERDRFSWFRDEEFARQTLAGLNPICIRRLTEFPIVSKLDPAVYGPAESALSKEILEKMMNGRMTVEEAMEKKRLFLLDYHDVFLPYVHRVRELPDTTLYGSRTVFFLSDEGTLMPLAIELTRPQSPTKPQWKRA-FTHGSDATESWL 535          
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 2.173e-48
Identity = 93/159 (58.49%), Postives = 121/159 (76.10%), Query Frame = 1
Query:   94 DNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPTMETSVFTFLWHSTECWL 570
            + IL FETP  + +DKF W RDEEF+R+TLAG+NPY+I L+ E+PLKS LDP +YGP ESAIT +L+E+++  +++VEEAI QK+LF+LD+HDLFLPYV K+R L  TT+YGSRT+FFLT  GTL+ +AIELTRP    +P     VFT    +T  WL
Sbjct:  403 EKILRFETPANIQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEEAISQKRLFMLDFHDLFLPYVHKIRSLDHTTMYGSRTVFFLTDDGTLQLLAIELTRPASPSQPQWR-QVFTPSTDATMSWL 560          
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.904e-44
Identity = 87/133 (65.41%), Postives = 105/133 (78.95%), Query Frame = 1
Query:  100 ILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRP 498
            +  FETPE  D DK  WFRDEEF+RQTLAG+NP SI+L+TE P+ S LD   YGP +S IT ELIEK+I  +++ EEA+ QKKLF+LDYHDL LPYV +VR+L + T+YGSRT+FFL   GTLRPIAIELTRP
Sbjct:  408 VFKFETPEIHDMDKLAWFRDEEFARQTLAGMNPLSIQLVTELPIVSKLDELKYGPADSLITKELIEKQINRIMTAEEAVAQKKLFMLDYHDLLLPYVHRVRKLDNKTMYGSRTLFFLADDGTLRPIAIELTRP 540          
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.726e-37
Identity = 76/159 (47.80%), Postives = 107/159 (67.30%), Query Frame = 1
Query:   94 DNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPTMETSVFTFLWHSTECWL 570
            + +L ++TP+ + +DKF W RD+EF+RQ LAG+NP +I  +  +P  S LDP +YGPPESAIT E I   + GM SV+EA++  +L++LDYHD+FLP+++++        YG+R +FFLT AGTL+PIAIEL  PPM         VFT    +T  WL
Sbjct:  381 EGLLRYDTPDIIKKDKFAWLRDDEFARQALAGINPVNIERLQAFPPVSKLDPAVYGPPESAITEEHIIGHLDGM-SVQEAVEGSRLYMLDYHDIFLPFLDRINAQDGRKAYGTRAVFFLTAAGTLKPIAIELCLPPMTDGCKRAKRVFTPPADATSNWL 538          
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 71/161 (44.10%), Postives = 107/161 (66.46%), Query Frame = 1
Query:   88 AGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPTMETSVFTFLWHSTECWL 570
            + + +L ++TP  + +DKF W RD+EF+RQ +AG+NP +I  +  +P  S LDP IYGPPES+IT   I   + G+ +V++A+ + KLFI+DYHD +LP+++++  +     Y +RTIFFLT AGTL+PIAIEL+ PP        + V T  + +T  WL
Sbjct:  393 SSEGMLRYDTPSILSKDKFAWLRDDEFARQAVAGINPVNIERLQVFPPVSKLDPAIYGPPESSITETHIAGHLNGL-TVQQAMDEAKLFIVDYHDAYLPFLDRINAIDGRKAYATRTIFFLTEAGTLKPIAIELSLPPAKPGEPRPSKVLTPPYDATSNWL 552          
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.540e-34
Identity = 66/139 (47.48%), Postives = 98/139 (70.50%), Query Frame = 1
Query:   94 DNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGM-ISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKS--TTLYGSRTIFFLTPAGTLRPIAIELTRPP 501
            + +L ++TP  +  D+F W RD EF RQ LAG+NP +I L+ E P++S LDP +YGP ES +T E+I +E+     ++E+A+++K+LF++DYHD+ LP+VEK+  +K      Y SRTIFF +  G LRP+AIEL+ PP
Sbjct:  395 ETLLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREVEHYGTTIEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIFFYSKNGALRPLAIELSLPP 533          

HSP 2 Score: 21.9422 bits (45), Expect = 8.540e-34
Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 2
Query:  572 WKLAQAHVLGS*CWLTPTLSTHWVK 646
            WKLA+AHV  +   +   L  HW++
Sbjct:  555 WKLAKAHVCSNDAGV-HQLVNHWLR 578          
BLAST of EY679576 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.505e-33
Identity = 69/176 (39.20%), Postives = 110/176 (62.50%), Query Frame = 1
Query:  100 ILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPTMETSVFTFLWHSTECWLLEASPSSCPWLMMLAYTHL 627
            +L ++TP+ + +DK  W RD+EF+RQ +AG+NP +I  +  +P  S LDP+IYGP  SA+T + I   + G  SV++A+++ +L++LDYHD+FLP+++++  L     Y +RTIFFLT  GTL+P+AIEL+ PP   K            H ++  L     ++  W+  LA  H+
Sbjct:  403 LLKYDTPKILSKDKNAWLRDDEFARQAIAGINPVNIERVKTFPPVSNLDPKIYGPQHSALTDDHIIGHLDGF-SVQQALEENRLYMLDYHDIFLPFLDRINALDGRKAYATRTIFFLTRLGTLKPVAIELSLPPHGPK------------HRSKRVLTPPVDATSNWMWQLAKAHV 565          
The following BLAST results are available for this feature:
BLAST of EY679576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX21_HORVU7.662e-5262.59Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOXC2_ORYSJ1.608e-5161.25Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOX2_ARATH3.583e-5159.63Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOX23_HORVU1.152e-4958.49Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOXC1_ORYSJ2.173e-4858.49Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX22_HORVU1.904e-4465.41Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOX5_ORYSJ1.726e-3747.80Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]
LOX6_ORYSJ1.237e-3544.10Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX6_ARATH8.540e-3447.48Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]
LOX3_ARATH7.505e-3339.20Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-G03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679576 ID=EY679576; Name=EY679576; organism=Citrus sinensis; type=EST; length=948bp
GATCGGGGTCCGGGAATCCCGGGTCCGAACCACGCGTCCGCGGACGCGTG
GGCGGACGCGTGCCTTTACGCGTGGGCGGACGCGTGGGCAGGAGATAATA
TTTTGCTGTTTGAGACGCCAGAAACAATGGACAGAGACAAATTCTTTTGG
TTTAGGGATGAGGAATTTTCTAGGCAAACTCTCGCTGGTCTCAACCCGTA
TAGCATAAGGTTGATCACGGAATGGCCGTTGAAAAGCACACTCGATCCTG
AAATTTACGGACCACCAGAATCAGCAATTACCACAGAATTGATTGAAAAA
GAAATTGGAGGAATGATTTCTGTTGAAGAGGCTATAAAACAAAAGAAGTT
GTTCATCTTAGATTACCATGACCTATTTTTACCATATGTGGAAAAAGTGA
GACAACTCAAAAGCACAACGTTGTATGGATCTCGCACAATTTTCTTCCTA
ACACCAGCCGGCACATTGAGACCAATAGCTATTGAGCTCACTCGGCCTCC
AATGAATGGCAAGCCCACAATGGAAACAAGTGTTTTTACCTTTCTTTGGC
ACTCTACTGAGTGCTGGCTTTTGGAAGCTAGCCCAAGCTCATGTCCTTGG
CTCATGATGCTGGCTTACACCCACCTTGTCAACCCATTGGGTTAAAAACT
CATTGGTGGCCAGAAACCTACGAAAAAGCAACCAAACCGGGCAACTCAAG
GGGGAAGCATCCAACCTAAAGGATTGTTGGATCTCTCTTTTTCCAATTCA
CAATGGAAATACAAGGGTTTGGCCCTAAAAACTCCCTGATAAAGTGTGAA
GGAAATATTTAAAGTCTACATTCTCCCCCGGGGAAAGAAATCCATAAGGA
AATTAAATTTATTGTTGGCCTAATAAGAAAGGAATGGGAGCCTTTGAACA
CAGTGAACATACACCCCCCAAGAGAACCCAGTATGGATCGGGGGGGAT
back to top