EY679574
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679574 vs. ExPASy Swiss-Prot
Match: RFAP_ECOLI (Lipopolysaccharide core heptose(I) kinase rfaP OS=Escherichia coli (strain K12) GN=rfaP PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.661e-12 Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 137 LAEPFFTLWAGRDAFAEL*KLDGQVYRGLGARRTLRTVVDGHGFFV*INRGIGWAEILKNLISAMLPVIG 346 L EP TLW G+DAFAE+ KL+G+V+R L RRTLR + G +F+ ++G EI+KNL+S +PV+G Sbjct: 4 LKEPLATLWRGKDAFAEVKKLNGEVFRELETRRTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLG 73 HSP 2 Score: 21.9422 bits (45), Expect = 1.661e-12 Identity = 10/22 (45.45%), Postives = 13/22 (59.09%), Query Frame = 1 Query: 370 IHRVLEVGVPTHDGPSLTAKGV 435 IHR+ +VGV T G KG+ Sbjct: 81 IHRLSDVGVDTMKGIGFGEKGL 102
BLAST of EY679574 vs. ExPASy Swiss-Prot
Match: RFAP_SALTY (Lipopolysaccharide core heptose(I) kinase rfaP OS=Salmonella typhimurium GN=rfaP PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 7.967e-12 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 137 LAEPFFTLWAGRDAFAEL*KLDGQVYRGLGARRTLRTVVDGHGFFV*INRGIGWAEILKNLISAMLPVIG 346 L P TLW G+DAF E+ L G+V+R L RRTLR +DG +F+ ++G EI+KNLIS +PV+G Sbjct: 4 LKAPLTTLWRGKDAFEEVKTLQGEVFRELETRRTLRFELDGKSYFLKWHKGTSLKEIVKNLISLRMPVLG 73 HSP 2 Score: 23.0978 bits (48), Expect = 7.967e-12 Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 1 Query: 370 IHRVLEVGVPTHDGPSLTAKGV 435 IHR+ E+GV T G KGV Sbjct: 81 IHRLHELGVDTMHGVGFGEKGV 102
BLAST of EY679574 vs. ExPASy Swiss-Prot
Match: RFAP_ECOLX (Lipopolysaccharide core heptose(I) kinase rfaP OS=Escherichia coli GN=rfaP PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.264e-11 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 137 LAEPFFTLWAGRDAFAEL*KLDGQVYRGLGARRTLRTVVDGHGFFV*INRGIGWAEILKNLISAMLPVIG 346 L EPF TLW G+D F E+ L G+V+R L RRTLR + G +F+ +RG EI+KNL+S +PV+G Sbjct: 4 LKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAGKSYFLKWHRGTTLKEIIKNLLSLRMPVLG 73 HSP 2 Score: 21.9422 bits (45), Expect = 2.264e-11 Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1 Query: 370 IHRVLEVGVPTHDGPSLTAKGV 435 IHR+ +VGV T G + KG+ Sbjct: 81 IHRLRDVGVDTMYGVAFGEKGM 102 The following BLAST results are available for this feature:
BLAST of EY679574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679574 ID=EY679574; Name=EY679574; organism=Citrus sinensis; type=EST; length=900bpback to top |