EY679573

Overview
NameEY679573
Unique NameEY679573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1054
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_BORPE (Thiazole biosynthesis protein thiG OS=Bordetella pertussis GN=thiG PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 3.875e-64
Identity = 113/130 (86.92%), Postives = 122/130 (93.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F+  VYCTDDPIQCRMLED+GAVAVMPLASLIGSGMGILNPWNLRLIIDQ+ VPV+VDAGVGTASDAAIAMELGCD VLMNTAIA ARDP+LMASAM+K VE GREA+LAGR+P+KLYS APSSPTEGLI
Sbjct:  132 FKVMVYCTDDPIQCRMLEDLGAVAVMPLASLIGSGMGILNPWNLRLIIDQSSVPVLVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAVEGGREAYLAGRVPRKLYSAAPSSPTEGLI 261          

HSP 2 Score: 36.965 bits (84), Expect = 3.875e-64
Identity = 24/52 (46.15%), Postives = 28/52 (53.85%), Query Frame = -1
Query:  497 VNTVRLGGGSCWTGHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 652
            V T+RL       GH   K + L DP +  P   PET KAT T  DEGF+VM
Sbjct:   86 VRTLRLAR-ELLDGHDLVKLEVLGDPQNLFPNM-PETLKATKTLVDEGFKVM 135          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_BORBR (Thiazole biosynthesis protein thiG OS=Bordetella bronchiseptica GN=thiG PE=3 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 3.875e-64
Identity = 113/130 (86.92%), Postives = 122/130 (93.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F+  VYCTDDPIQCRMLED+GAVAVMPLASLIGSGMGILNPWNLRLIIDQ+ VPV+VDAGVGTASDAAIAMELGCD VLMNTAIA ARDP+LMASAM+K VE GREA+LAGR+P+KLYS APSSPTEGLI
Sbjct:  132 FKVMVYCTDDPIQCRMLEDLGAVAVMPLASLIGSGMGILNPWNLRLIIDQSSVPVLVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAVEGGREAYLAGRVPRKLYSAAPSSPTEGLI 261          

HSP 2 Score: 36.965 bits (84), Expect = 3.875e-64
Identity = 24/52 (46.15%), Postives = 28/52 (53.85%), Query Frame = -1
Query:  497 VNTVRLGGGSCWTGHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 652
            V T+RL       GH   K + L DP +  P   PET KAT T  DEGF+VM
Sbjct:   86 VRTLRLAR-ELLDGHDLVKLEVLGDPQNLFPNM-PETLKATRTLVDEGFKVM 135          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_BORPA (Thiazole biosynthesis protein thiG OS=Bordetella parapertussis GN=thiG PE=3 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 8.591e-64
Identity = 112/130 (86.15%), Postives = 122/130 (93.85%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F+  VYCTDDPIQCRMLED+G+VAVMPLASLIGSGMGILNPWNLRLIIDQ+ VPV+VDAGVGTASDAAIAMELGCD VLMNTAIA ARDP+LMASAM+K VE GREA+LAGR+P+KLYS APSSPTEGLI
Sbjct:  132 FKVMVYCTDDPIQCRMLEDLGSVAVMPLASLIGSGMGILNPWNLRLIIDQSSVPVLVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAVEGGREAYLAGRVPRKLYSAAPSSPTEGLI 261          

HSP 2 Score: 36.965 bits (84), Expect = 8.591e-64
Identity = 24/52 (46.15%), Postives = 28/52 (53.85%), Query Frame = -1
Query:  497 VNTVRLGGGSCWTGHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 652
            V T+RL       GH   K + L DP +  P   PET KAT T  DEGF+VM
Sbjct:   86 VRTLRLAR-ELLDGHDLVKLEVLGDPQNLFPNM-PETLKATRTLVDEGFKVM 135          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_BORA1 (Thiazole biosynthesis protein thiG OS=Bordetella avium (strain 197N) GN=thiG PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.706e-62
Identity = 106/131 (80.92%), Postives = 124/131 (94.66%), Query Frame = -2
Query:  115 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLIT 507
            F+  VYCTDDPIQCRMLED+G VA+MPLASLIGSGMGILNPWNLRLI+DQ+++PV+VDAG+GT SDAA+AME+GC AVLMNTAI+ A+DP+LMASAMKKGVE+GREAFLAGR+P+KLYSG PSSPTEGLI+
Sbjct:  132 FKVMVYCTDDPIQCRMLEDIGVVAIMPLASLIGSGMGILNPWNLRLILDQSKLPVIVDAGLGTPSDAAVAMEMGCAAVLMNTAISGAKDPILMASAMKKGVEAGREAFLAGRVPRKLYSGVPSSPTEGLIS 262          

HSP 2 Score: 35.039 bits (79), Expect = 2.706e-62
Identity = 23/52 (44.23%), Postives = 27/52 (51.92%), Query Frame = -1
Query:  497 VNTVRLGGGSCWTGHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 652
            V T+RL       GH   K + L DP +  P   PET KA  T  DEGF+VM
Sbjct:   86 VRTLRLAR-ELLDGHDLVKLEVLGDPTNLFPNM-PETLKAAKTLVDEGFKVM 135          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_AZOSE (Thiazole biosynthesis protein thiG OS=Azoarcus sp. (strain EbN1) GN=thiG PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 9.280e-60
Identity = 110/130 (84.62%), Postives = 117/130 (90.00%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F+  VYC DDPIQ +MLED+G VAVMPLASLIGSGMGILNPWNLRLIIDQA VPV+VDAGVGTASDAAIAMELGCD VLMNTAIA A+DPVLMASAMKK VE+GREAFLAGRMP+K YS  PSSPT GLI
Sbjct:  130 FQVMVYCADDPIQAKMLEDIGCVAVMPLASLIGSGMGILNPWNLRLIIDQANVPVLVDAGVGTASDAAIAMELGCDGVLMNTAIAHAKDPVLMASAMKKAVEAGREAFLAGRMPRKHYSADPSSPTSGLI 259          

HSP 2 Score: 33.8834 bits (76), Expect = 9.280e-60
Identity = 23/52 (44.23%), Postives = 26/52 (50.00%), Query Frame = -1
Query:  497 VNTVRLGGGSCWTGHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 652
            V T+RL       GHA  K + L DP    P   PET KA  T   +GFQVM
Sbjct:   84 VRTLRLAR-ELLDGHALVKLEVLGDPVSLFPNM-PETLKAAETLVKDGFQVM 133          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_DECAR (Thiazole biosynthesis protein thiG OS=Dechloromonas aromatica (strain RCB) GN=thiG PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 9.281e-60
Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F+  VYC DDPIQC+MLE++G VAVMPLASLIGSGMGI+NPWNLRLIID A+VP++VDAGVGTASDAAIAMELGCD VLMNTAIA A+DP+LMASAMKKGVE+GREAFLAGRM +K YS  PSSPT GLI
Sbjct:  129 FQVMVYCADDPIQCKMLEEIGCVAVMPLASLIGSGMGIVNPWNLRLIIDNAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAHAKDPILMASAMKKGVEAGREAFLAGRMARKYYSADPSSPTSGLI 258          

HSP 2 Score: 34.2686 bits (77), Expect = 9.281e-60
Identity = 23/52 (44.23%), Postives = 26/52 (50.00%), Query Frame = -1
Query:  497 VNTVRLGGGSCWTGHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 652
            V T+RL       GH   K + L DP +  P   PET KA  T   EGFQVM
Sbjct:   83 VRTLRLAR-ELLDGHPLCKLEVLGDPTNLFPNM-PETLKAAETLVKEGFQVM 132          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_AZOSB (Thiazole biosynthesis protein thiG OS=Azoarcus sp. (strain BH72) GN=thiG PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.239e-58
Identity = 108/130 (83.08%), Postives = 115/130 (88.46%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VYC DDPIQ +MLE++G VAVMPLASLIGSGMGILNPWNLRLIID A+VPV+VDAGVGTASDAAIAMELGCD VLMNTAIAAA  PVLMASAMKK VE+GREAFLAGRMP+K YS  PSSPT GLI
Sbjct:  130 FEVMVYCADDPIQAKMLEEIGCVAVMPLASLIGSGMGILNPWNLRLIIDNAKVPVLVDAGVGTASDAAIAMELGCDGVLMNTAIAAAGQPVLMASAMKKAVEAGREAFLAGRMPRKFYSADPSSPTAGLI 259          

HSP 2 Score: 33.113 bits (74), Expect = 2.239e-58
Identity = 22/52 (42.31%), Postives = 26/52 (50.00%), Query Frame = -1
Query:  497 VNTVRLGGGSCWTGHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 652
            V T+RL       GHA  K + L DP    P   PET KA  T   +GF+VM
Sbjct:   84 VRTLRLAR-ELLDGHALVKLEVLGDPKSLFPNM-PETLKAAETLVKDGFEVM 133          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_THIDA (Thiazole biosynthesis protein thiG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=thiG PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.086e-54
Identity = 103/131 (78.63%), Postives = 115/131 (87.79%), Query Frame = -2
Query:  115 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLIT 507
            F+  VY +DDPI  + LED+G VAVMPLASLIGSGMGILNPWNL++IID+  VPV+VDAGVGTASDA IAMELGCDAVLMNTAIA A DPVLMASAMKK VE+GREAFLAGRMPKK+Y  +PSSPT GLI+
Sbjct:  129 FQVMVYTSDDPIAAKQLEDIGCVAVMPLASLIGSGMGILNPWNLQIIIDRLTVPVIVDAGVGTASDATIAMELGCDAVLMNTAIAGASDPVLMASAMKKAVEAGREAFLAGRMPKKIYRASPSSPTSGLIS 259          

HSP 2 Score: 27.7202 bits (60), Expect = 1.086e-54
Identity = 17/39 (43.59%), Postives = 18/39 (46.15%), Query Frame = -1
Query:  497 GHAFAKWKGLADPPHAVPQTCPETFKAT*TCGDEGFQVM 613
            GHA  K + L D     P    ET KA      EGFQVM
Sbjct:   95 GHALVKLEVLGDAESLYPNVA-ETIKAAEVLVKEGFQVM 132          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_METFK (Thiazole biosynthesis protein thiG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=thiG PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.003e-53
Identity = 103/130 (79.23%), Postives = 115/130 (88.46%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F   VYC+DDPI  + LEDMG  AVMPLASLIGSGMGILNPWNL++II+ A++PV+VDAGVGTASDAAIAMELGC  VLMNTAIAAA+DPVLMA AMKK VE+GREAFLAGRMP+KLYS +PSSPT GLI
Sbjct:  129 FDVMVYCSDDPIIAKQLEDMGCAAVMPLASLIGSGMGILNPWNLQIIIENAKIPVLVDAGVGTASDAAIAMELGCQGVLMNTAIAAAKDPVLMAGAMKKAVEAGREAFLAGRMPRKLYSASPSSPTSGLI 258          
BLAST of EY679573 vs. ExPASy Swiss-Prot
Match: THIG_NITMU (Thiazole biosynthesis protein thiG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=thiG PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.463e-53
Identity = 102/130 (78.46%), Postives = 118/130 (90.77%), Query Frame = -2
Query:  118 FRSWVYCTDDPIQCRMLEDMGAVAVMPLASLIGSGMGILNPWNLRLIIDQARVPVVVDAGVGTASDAAIAMELGCDAVLMNTAIAAARDPVLMASAMKKGVESGREAFLAGRMPKKLYSGAPSSPTEGLI 507
            F+  VY +DDPI  R LE++G VA+MPLASLIGSGMGILNPWNL++II+ A+VPV+VDAGVGTASDAAIAMELGCD VLMNTAIAAA++PVLMASAMKK VE+GREA+LAGRMPKKLYS +PSSP EG+I
Sbjct:  129 FQVMVYTSDDPIAARQLEEIGCVAIMPLASLIGSGMGILNPWNLQIIIENAKVPVIVDAGVGTASDAAIAMELGCDGVLMNTAIAAAQNPVLMASAMKKAVEAGREAYLAGRMPKKLYSASPSSPVEGVI 258          
The following BLAST results are available for this feature:
BLAST of EY679573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 398
Match NameE-valueIdentityDescription
THIG_BORPE3.875e-6486.92Thiazole biosynthesis protein thiG OS=Bordetella p... [more]
THIG_BORBR3.875e-6486.92Thiazole biosynthesis protein thiG OS=Bordetella b... [more]
THIG_BORPA8.591e-6486.15Thiazole biosynthesis protein thiG OS=Bordetella p... [more]
THIG_BORA12.706e-6280.92Thiazole biosynthesis protein thiG OS=Bordetella a... [more]
THIG_AZOSE9.280e-6084.62Thiazole biosynthesis protein thiG OS=Azoarcus sp.... [more]
THIG_DECAR9.281e-6081.54Thiazole biosynthesis protein thiG OS=Dechloromona... [more]
THIG_AZOSB2.239e-5883.08Thiazole biosynthesis protein thiG OS=Azoarcus sp.... [more]
THIG_THIDA1.086e-5478.63Thiazole biosynthesis protein thiG OS=Thiobacillus... [more]
THIG_METFK2.003e-5379.23Thiazole biosynthesis protein thiG OS=Methylobacil... [more]
THIG_NITMU4.463e-5378.46Thiazole biosynthesis protein thiG OS=Nitrosospira... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-F12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679573 ID=EY679573; Name=EY679573; organism=Citrus sinensis; type=EST; length=1054bp
CCGGTAACGGGTCGGGAATTCCCGGGTCGACGCCGGCGATGGTCAGCGCG
TTGGGGATCTGGCCCTTTTTGGCGGCCGGCTGGCGGCTGCTCATTTGGCG
GCGCCGGGGGCGGCGGTGATCAGGCCTTCGGTGGGCGAGCTGGGCGCGCC
GCTGTAGAGCTTTTTCGGCATGCGGCCGGCCAGGAAGGCCTCGCGGCCGG
ACTCGACGCCCTTTTTCATGGCGCTGGCCATCAGCACCGGGTCGCGCGCG
GCGGCGATGGCGGTGTTCATCAGCACGGCGTCGCAGCCCAGTTCCATGGC
GATGGCGGCGTCCGAGGCGGTGCCCACGCCGGCGTCCACCACCACCGGCA
CGCGCGCCTGGTCGATGATCAGGCGTAGATTCCAGGGGTTCAAGATGCCC
ATGCCGGAGCCGATCAGCGAGGCCAGCGGCATCACGGCCACGGCGCCCAT
GTCTTCAAGCATGCGGCACTGGATGGGATCGTCGGTGCAATAGACCCATG
ACCTGAAAGCCCTCATCCCCACACGTCTAGGTGGCCTTGAAGGTTTCCGG
GCATGTTTGGGGAACAGCGTGTGGCGGATCGGCCAGCCCTTTCCACTTGG
CAAATGCGTGGCCCGTCCAGCAACTCCCGCCGCCCAGGCGCACCGTGTTC
ACCGGTGTCCTTCGGCCTAATATATTTCCGTCTGCGGTTGGGACAACATC
GATATACTTGGACACTCAAGACATTAATCCCGAGCATGGTAGGTCCCCCC
CCCGGGTTTCCTGTCCCATAAGTTTGGTAGAGGAAGAAAAGGCTTCCCTT
ATAATGATCCTCCCATACCCCACTGTGTCTTCCATACTCTGGGTGACGGG
GTATATTAATATTAAGAATCTACTAGATGATATTATCGCTTCACTCCCAG
AATAACTATCTGAAGCTGTGTCGATAATAATATATACATGCGTACAGTAA
AGTATTTATTAGAAAAAAAGAGTGATATAGTTATATGACACACTGTGACA
TCAGCATGTGTAGGTATGTCTTATAATTTTACATCATGTTGGTATCATTA
GCTT
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