EY679572

Overview
NameEY679572
Unique NameEY679572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1001
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679572 vs. ExPASy Swiss-Prot
Match: BI1_ARATH (Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 8.108e-49
Identity = 92/140 (65.71%), Postives = 115/140 (82.14%), Query Frame = 2
Query:   71 MDAFSSYFESRNGEARW--ESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVA 484
            MDAFSS+F+S+ G   W  +SLKNF QISP VQ+HLK+VYL+LCCALVASA G YLH+LWNIGG+LT    IG+M+WLL+ P YE +KR+SLL  +A+ +GAS+GPLI +AI +DPSILI+AFVGT +AF CFS AAM+A
Sbjct:    1 MDAFSSFFDSQPGSRSWSYDSLKNFRQISPAVQNHLKRVYLTLCCALVASAFGAYLHVLWNIGGILTTIGCIGTMIWLLSCPPYEHQKRLSLLFVSAVLEGASVGPLIKVAIDVDPSILITAFVGTAIAFVCFSAAAMLA 140          
BLAST of EY679572 vs. ExPASy Swiss-Prot
Match: BI1_ORYSJ (Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN=BI1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.298e-38
Identity = 80/141 (56.74%), Postives = 102/141 (72.34%), Query Frame = 2
Query:   71 MDAFSSYFESRNGEAR---WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVA 484
            MDAF S   +    A    ++SLKNF QISP VQSHLK VYL+LC AL ASA G YLH+  NIGG+LT+   +GS+ WL + P +EE+KR  +L+A AL +GAS+GPLI LA+  D SIL++AFVGT +AF CF+ AA+VA
Sbjct:    1 MDAFYSTSSAYGAAASGWGYDSLKNFRQISPAVQSHLKLVYLTLCVALAASAVGAYLHVALNIGGMLTMLGCVGSIAWLFSVPVFEERKRFGILLAAALLEGASVGPLIKLAVDFDSSILVTAFVGTAIAFGCFTCAAIVA 141          
BLAST of EY679572 vs. ExPASy Swiss-Prot
Match: BI1_BOVIN (Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.104e-21
Identity = 53/126 (42.06%), Postives = 81/126 (64.29%), Query Frame = 2
Query:  119 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVA 484
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +G M+WL+ATP S+E E+KR+ LL   A   G  +GP +DL I I+PSIL +AF+GT + F CF+++A+ A
Sbjct:   10 FDALFKFSHITPSTQQHLKKVYASFALCMFVAAAGAYIHVVTHFIQAGLLSALGSLGLMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALYA 135          
BLAST of EY679572 vs. ExPASy Swiss-Prot
Match: BI1_PIG (Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.441e-21
Identity = 53/126 (42.06%), Postives = 80/126 (63.49%), Query Frame = 2
Query:  119 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVA 484
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++      GLL+    +G M+WL+ATP S+E E+KR+ LL   A   G  +GP +DL I I+PSIL +AF+GT + F CF+++A+ A
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGSLGLMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALYA 135          
BLAST of EY679572 vs. ExPASy Swiss-Prot
Match: BI1_MOUSE (Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.342e-21
Identity = 51/126 (40.48%), Postives = 80/126 (63.49%), Query Frame = 2
Query:  119 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVA 484
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP S+E E+KR+ LL   A   G  +GP ++L I ++PSIL +AF+GT + F CFS++A+ A
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLALMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAVNPSILPTAFMGTAMIFTCFSLSALYA 135          
BLAST of EY679572 vs. ExPASy Swiss-Prot
Match: BI1_PAROL (Probable Bax inhibitor 1 OS=Paralichthys olivaceus GN=tmbim6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.220e-20
Identity = 52/126 (41.27%), Postives = 78/126 (61.90%), Query Frame = 2
Query:  119 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP--SYEEKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVA 484
            ++SL  F QIS   Q HLK VY SL   +  +A G Y+H++  +  GG+L+V   +G M WL  TP  S  EKKR+++L   A   G  + P +D  I I+PSI+++AF+GT + F CF+++A+ A
Sbjct:   10 FDSLFKFSQISHSTQVHLKNVYSSLAVCMFVAAAGSYVHVVTRLFQGGMLSVLGSLGMMFWLAMTPHNSETEKKRLAILAGFAFLTGVGLCPTLDFVIAINPSIIVTAFLGTSVIFVCFTLSALYA 135          
BLAST of EY679572 vs. ExPASy Swiss-Prot
Match: BI1_HUMAN (Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.349e-19
Identity = 49/126 (38.89%), Postives = 79/126 (62.70%), Query Frame = 2
Query:  119 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVA 484
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP S+E E+KR+ LL   A   G  +GP ++  I ++PSIL +AF+GT + F CF+++A+ A
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTLSALYA 135          
BLAST of EY679572 vs. ExPASy Swiss-Prot
Match: BI1_PONAB (Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.762e-19
Identity = 49/126 (38.89%), Postives = 79/126 (62.70%), Query Frame = 2
Query:  119 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVA 484
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP S+E E+KR+ LL   A   G  +GP ++  I ++PSIL +AF+GT + F CF+++A+ A
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCITVNPSILPTAFMGTAMIFTCFTLSALYA 135          
BLAST of EY679572 vs. ExPASy Swiss-Prot
Match: BI1_RAT (Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 3.005e-19
Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 2
Query:  119 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVA 484
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++      GLL+    +  M+ L+ATP S+E E+KR+ LL   A   G  +GP ++L I I+PSIL +AF+GT + F CFS++A+ A
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGALALMICLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAINPSILPTAFMGTAMIFTCFSLSALYA 135          
The following BLAST results are available for this feature:
BLAST of EY679572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
BI1_ARATH8.108e-4965.71Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE... [more]
BI1_ORYSJ1.298e-3856.74Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN... [more]
BI1_BOVIN1.104e-2142.06Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1[more]
BI1_PIG1.441e-2142.06Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1[more]
BI1_MOUSE9.342e-2140.48Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=... [more]
BI1_PAROL1.220e-2041.27Probable Bax inhibitor 1 OS=Paralichthys olivaceus... [more]
BI1_HUMAN1.349e-1938.89Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=... [more]
BI1_PONAB1.762e-1938.89Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=... [more]
BI1_RAT3.005e-1940.48Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-F10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679572 ID=EY679572; Name=EY679572; organism=Citrus sinensis; type=EST; length=1001bp
CTCCATCTGAATTTTCTCTTGCCCTTTTCTCGAGTTTTCTTTTTCGGACA
AGCAACGTCAATAATCAAGAATGGATGCTTTCTCTTCCTACTTCGAGTCT
CGTAACGGCGAAGCCCGCTGGGAGTCCTTGAAAAACTTTCACCAGATCTC
TCCCGTCGTCCAGTCTCACCTTAAGCAGGTTTATCTGTCATTATGCTGTG
CACTGGTGGCATCAGCCACTGGAGTCTACCTCCATCTCCTCTGGAACATT
GGTGGCTTACTTACGGTTTTTGCAATGATTGGATCAATGGTTTGGCTTCT
CGCAACCCCTAGTTATGAAGAGAAAAAGAGGGTTTCTCTGCTCATGGCTA
CCGCTCTCTTTAAAGGTGCATCAATTGGTCCTTTGATTGATCTCGCCATT
CAAATTGACCCAAGCATTCTGATATCTGCATTTGTGGGAACCGGGCTGGC
TTTCGCTTGTTTTTCTGTAGCTGCCATGGTTGCAAGGCGGAGAGAGTATC
TCTATCTTGGTGGCTTGCTTTCCTCCAGGCTGTCCAAGCTTCTTTGGTTG
GCTTTTTGCTTCCACTATCTTTGGGTGGTTCAACAGCTATCTTCAAGTTT
TGAGTATAAACTTTGGGCTGTGGGGGTTGGTTGGGTACTTCCTGGGAGGA
AACCCATGGAAAAAATAGAAAAAAGCTTCACTTTTTGGAAAATTTGGTAT
TAGGTCAGGTCATGCTCCGGGCACCTTTATTCTTGGACTTTGGTTGGTGG
TCTTATGTTTCTAATTTTCCATAAAACCTGGACTGAAACCTAGGACTATC
TTGAAAAACAATATGGAAAAAAAAAAAAAAAAAAAAGGAAAAAAATTTGG
AATCTTCCTCTGTATAGCTTGGGAAACGGACACACTGGCCTTGTGTTTTT
TAATTTAAGGGGGGTCGTACAAAAAAATATACCAATACTTATTTTTGTGG
GGTTGGCGGGCAATATTATTCCCTAGTGGGTGTGCGCCTTTTGTTCGCTT
T
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