EY744711

Overview
NameEY744711
Unique NameEY744711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5241 contig Csv1_Contig5241:455..1427. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY744711 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.752e-11
Identity = 32/77 (41.56%), Postives = 53/77 (68.83%), Query Frame = 3
Query:   54 VFKGKVGLLRTSVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHGM 284
            V+KG++      VA+K+LD+   + ++ F  E+++ S LHHPN+V L+G+C D +Q L L+Y+++  GSLE HLH +
Sbjct:  100 VYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEFMPLGSLEDHLHDL 175          
BLAST of EY744711 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 4.394e-11
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 3
Query:   90 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHG 281
            VA+K L     +  K F  E+ +   +HH N+V LVG+C + ++ L LIY+Y++ G L+ H+ G
Sbjct:  602 VAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDK-LALIYEYMANGDLDEHMSG 664          

HSP 2 Score: 38.5058 bits (88), Expect = 4.394e-11
Identity = 17/34 (50.00%), Postives = 20/34 (58.82%), Query Frame = 1
Query:  379 EKKKGVRGNSTLPWSVRYKVALGIAESVAYLHNG 480
            E   G RG S L W  R K+AL  A+ + YLHNG
Sbjct:  660 EHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNG 693          
BLAST of EY744711 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 4.484e-11
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 3
Query:   90 VAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHGMLF 290
            VAIK+    D    + F  E+++ S ++H N+V L+G C++ E  L L+Y++++GGSL  HLHG +F
Sbjct:  133 VAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPL-LVYEFITGGSLFDHLHGSMF 198          

HSP 2 Score: 30.4166 bits (67), Expect = 4.484e-11
Identity = 11/25 (44.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  406 STLPWSVRYKVALGIAESVAYLHNG 480
            S+L W  R ++A+ +A ++AYLH+G
Sbjct:  200 SSLTWEHRLEIAIEVAGAIAYLHSG 224          
BLAST of EY744711 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 7.460e-11
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 3
Query:   87 SVAIKRLDKEDKESSKAFCRELMIASSLHHPNIVPLVGFCIDPEQGLFLIYKYVSGGSLERHLHG 281
            SVA+KRL   + + ++ F  E+ I + L HPN+V L G      + L L+Y+YV+ G+L  HLHG
Sbjct:  368 SVAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHG 432          

HSP 2 Score: 32.7278 bits (73), Expect = 7.460e-11
Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 1
Query:  376 AEKKKGVRGN-STLPWSVRYKVALGIAESVAYLH 474
            A+   G + N S+LPWS+R K+A+  A ++ YLH
Sbjct:  427 ADHLHGPQANPSSLPWSIRLKIAVETASALKYLH 460          
The following BLAST results are available for this feature:
BLAST of EY744711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PBS1_ARATH3.752e-1141.56Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y5181_ARATH4.394e-1137.50Probable LRR receptor-like serine/threonine-protei... [more]
WAKLS_ARATH4.484e-1140.30Putative wall-associated receptor kinase-like 16 O... [more]
Y1839_ARATH7.460e-1141.54Probable serine/threonine-protein kinase At1g18390... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-F08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744711 ID=EY744711; Name=EY744711; organism=Citrus sinensis; type=EST; length=973bp
GGACCGGTCCCGGATTCCGGGGTCGACCCCCGCGTCCGGGAGCTTTGAGT
TTTGTGTTTAAGGGTAAAGTTGGGCTTTTGAGAACTTCAGTGGCTATTAA
GAGATTAGACAAAGAAGATAAGGAGTCTTCAAAAGCATTTTGTAGAGAAC
TGATGATTGCTAGTTCTCTTCACCATCCAAATATTGTTCCTCTTGTGGGA
TTTTGCATTGATCCAGAACAGGGTTTGTTCTTGATATACAAGTATGTTTC
TGGTGGTAGCTTAGAGCGCCATTTACATGGTATGTTGTTCTCTTAGCTCT
TTTTAATAGAAAGTTTTTGGAATTTGATCTCAGTTTGTATGATGTTGAGT
GATTTGTGATGCGTTGTGCCCATTTGCAGAGAAGAAGAAAGGAGTAAGAG
GTAATTCGACATTGCCTTGGTCTGTTAGGTATAAGGTTGCCCTTGGAATT
GCAGAATCAGTGGCATATCTGCACAATGGACATGAAAGGATGTGTTGTTC
CATAATACTTTAACCCCCTCAAACATTCTCCTTTCTTCCAAAAAAAATAC
CTAAGTTATGTGATTTTGGATTAACCTCCTTGGGACTTCCGCACCTTCAG
TTCCTTTCCCTCCTGCTAAACTTGTTAAGGGAACCCTTGGGTATGATTTC
AACACCAAGGGGTATTTCTTTCCAAATTGTTAACACAACAATGCGTTCTG
GATTTTCCCGGTTCACTGGAACAAATGCGAACAACTTTTTTTATTTTACC
GCTCCTTTGGCTCCCTGGACATTCCCCACCTTGGACAAAATCCCTAAATA
TACACGCCTGTCACGCCTCTTCGGTGGTCGAACTGTCCCTTGCCCGCCTC
ATCCTCTCTACCGAGCTTAACTTGCCGCTCAAGGATGTTCCACTAGAACT
AAACTCACATGTGGCCCCCCGCACGTGTACGCCGCTACATCAATCCTACA
ACACCCTAAACAAAGACCCACCA
back to top