EY744709

Overview
NameEY744709
Unique NameEY744709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744709 vs. ExPASy Swiss-Prot
Match: APX4_SOLLC (Putative L-ascorbate peroxidase, chloroplastic OS=Solanum lycopersicum GN=CLEB3J9 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.654e-24
Identity = 78/182 (42.86%), Postives = 103/182 (56.59%), Query Frame = 3
Query:   69 CHKIDTQITVEAGFGIRDILKCIGATIGMEIIS-SSGSVEMARAADLIQRRQRSEFISNIQETLQTALKGNPDLIPSLLTLALNDAMTYDKFVGYKIWGP*WIHKVQLRDKHTRKYGSFCCHEFVRGSKERT*ISILRVDQ----YSFADLIPHGDQSGVTTTFLASPHPPMWKGTTEKGHL 599
            C K  +++  E  F  RDIL+ +GA +GM++I+ SS  +E+A AADLIQRRQRS+F S I+ TL  A+K NPD+IPSLLTLALNDA+TYDK    K  GP    +           G       +  SK+     ++ +D      S+ADLI    QS V +TF+AS       G  EKG L
Sbjct:   35 CCKFRSELNNEDRFHRRDILQSVGAAVGMDLIARSSAFIEVANAADLIQRRQRSDFQSKIKLTLYDAIKANPDIIPSLLTLALNDAITYDK--ATKTGGPNGSIRFSSEISRPENKGLDAALNLLEESKK-----VIDLDSKGGPISYADLIQFAAQSAVKSTFIASAISKC-GGNVEKGTL 208          
BLAST of EY744709 vs. ExPASy Swiss-Prot
Match: APX4_ARATH (Probable L-ascorbate peroxidase 4, chloroplastic OS=Arabidopsis thaliana GN=APX4 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.992e-21
Identity = 77/194 (39.69%), Postives = 101/194 (52.06%), Query Frame = 3
Query:   27 TVATKCSAHADAIRCHKIDTQITVEA-GFGIRDILKCIGATIGMEIISSS--GSVEMARAADLIQRRQRSEFISNIQETLQTALKGNPDLIPSLLTLALNDAMTYDKFVGYKIWGP*WIHKVQLRDKHTRKYGSFCCHEFVRGSKERT*ISILRVDQYSFADLIPHGDQSGVTTTFLASPHPPMWKGTTEKGHL 599
            T  +  S  +  IRC KI+ Q++ E+  F  RD+LK  G  +GME+I +    +V  A+AADL QRRQRSEF S I+  L T +K  P+L+PSLL LALNDAMTYDK    K  G     +           G       +   K+    SI +    S+AD+I    QS V  T+LAS       G  EKG+L
Sbjct:   23 TTLSSSSHRSAVIRCSKIEPQVSGESLAFHRRDVLKLAGTAVGMELIGNGFINNVGDAKAADLNQRRQRSEFQSKIKILLSTTIKAKPELVPSLLKLALNDAMTYDK--ATKSGGANGSIRFSSELSRAENEGLSDGLSLIEEVKKEI-DSISKGGPISYADIIQLAGQSAVKFTYLASAIRKC-GGNEEKGNL 212          
The following BLAST results are available for this feature:
BLAST of EY744709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
APX4_SOLLC2.654e-2442.86Putative L-ascorbate peroxidase, chloroplastic OS=... [more]
APX4_ARATH7.992e-2139.69Probable L-ascorbate peroxidase 4, chloroplastic O... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-F05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744709 ID=EY744709; Name=EY744709; organism=Citrus sinensis; type=EST; length=903bp
CTCCCCCATCGCGCAGGGCTTTCTCTACTGTGGCCACCAAATGCTCCGCT
CATGCTGATGCTATACGTTGTCATAAAATTGATACTCAAATTACTGTTGA
AGCTGGTTTTGGTATAAGGGATATTCTGAAATGCATTGGTGCGACCATTG
GCATGGAAATAATATCAAGCTCAGGATCAGTTGAAATGGCACGTGCTGCT
GATTTGATACAACGCAGACAGCGTTCGGAGTTTATTTCCAATATCCAGGA
GACTCTCCAAACTGCTCTCAAGGGAAATCCAGATCTTATCCCATCTCTAC
TAACTTTGGCACTCAATGATGCCATGACTTATGATAAGTTTGTAGGCTAC
AAAATCTGGGGGCCCTAATGGATCCATAAGGTTCAGCTCAGAGATAAGCA
CACCAGAAAATACGGGTCTTTCTGCTGCCATGAATTTGTTAGAGGAAGCA
AAGAAAGGACATAGATTTCTATTCTAAGGGTGGACCAATATTCCTTTGCC
GATCTCATCCCACATGGAGACCAAAGTGGCGTAACGACAACATTTTTGGC
ATCACCCCATCCACCAATGTGGAAGGGAACGACAGAGAAAGGGCACCTTA
ATTCAAACCGGAATATGGTCTCACCGGCCCAGCGGGGCCCAGTTTCACAC
ACCACCTCTTCAAACGCGACAATATGCCCCAGGACCCATCATCCCCAGAG
AAGAGGCGTCTCCCCAGTCAAAACAAAACACATATACCCAAGCAACACCA
CACCAAAAATACTTCCCAACCCACTTGCACCCCGACCACCCACCCCCAAC
TAACCGCTCGCCGCCTGCCAGATTGAACGCAACCCACACAAAGACCAACC
AAAAGGAACCACCAACACTAGCCTCATACCACACATCACTTCCACCCCCT
ACT
back to top