EY744706

Overview
NameEY744706
Unique NameEY744706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744706 vs. ExPASy Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.901e-26
Identity = 56/122 (45.90%), Postives = 81/122 (66.39%), Query Frame = 3
Query:  114 PNTKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAQP 479
            PN   + ++GRVYCDTC+AGF T  T YIAGAKV++ECK   + ++  + +G TD+TGTY I + + H++ +C  VL++SP+ DC  V   R+R+ V+LT   GIS   R AN +G+ K  P
Sbjct:   30 PNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTGKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLRPANPLGYFKDVP 151          
BLAST of EY744706 vs. ExPASy Swiss-Prot
Match: OLEE1_BETVE (Olee1-like protein OS=Betula verrucosa PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24
Identity = 52/120 (43.33%), Postives = 79/120 (65.83%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPG---RERSRVILTSYNGISSETRYANSMGFMKAQP 479
            F VEG+VYCD C+  F T  +TY+ GAKV +EC++R+   ++YS + +TD +GTY+I V  DH++++C+  L  S   DC  V+     ++ +R+ LT  NGIS+  R AN +GFMK +P
Sbjct:   27 FFVEGKVYCDNCRTQFVTKLSTYMKGAKVSLECRNREGGTLIYSSDSETDKSGTYRIPVDGDHEEEICEIALKKSSDPDCSEVSKDPFLKKSARISLTKNNGISTPVRLANPLGFMKKKP 146          
BLAST of EY744706 vs. ExPASy Swiss-Prot
Match: LAT52_SOLLC (Anther-specific protein LAT52 OS=Solanum lycopersicum GN=LAT52 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.490e-22
Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAQ 476
            F VEG+VYCDTC+  FET  +  + GA VK++C++  +    +S EG TD  G YK+ V+ DH++ +C+  ++ SP+ DCK    G E++R+  +   GI +  R+AN + FMKA+
Sbjct:   27 FDVEGKVYCDTCRVQFETKLSENLEGATVKLQCRNISTEAETFSVEGVTDKDGKYKLTVNGDHENDICEVTVVKSPREDCKESVSGYEKARIECSDNVGIHNAVRFANPLFFMKAE 142          
BLAST of EY744706 vs. ExPASy Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.334e-22
Identity = 51/118 (43.22%), Postives = 70/118 (59.32%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAQP 479
            F V GRVYCD C+AGFET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS NGI  +  RYAN + F + +P
Sbjct:    6 FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEIDQDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEP 123          
BLAST of EY744706 vs. ExPASy Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.809e-21
Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAQP 479
            F V GRVYCD C+AGFET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS  GI  +  RYAN + F + +P
Sbjct:    6 FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEIDQDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEP 123          
BLAST of EY744706 vs. ExPASy Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.920e-20
Identity = 47/120 (39.17%), Postives = 74/120 (61.67%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAP---GRERSRVILTSYNGISSETRYANSMGFMKAQP 479
            F V+G VYCDTC+  F T  +T + GA VK+EC++  +    +  E  TD  G Y I V+ D +D +C+  L+ SP ++C  V+     ++ ++V LTS NG +S+ R AN++GFM+ +P
Sbjct:   30 FKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRSANALGFMRKEP 149          
BLAST of EY744706 vs. ExPASy Swiss-Prot
Match: ALL1_OLEEU (Major pollen allergen OS=Olea europaea PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.013e-19
Identity = 42/122 (34.43%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  111 RPNTKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAQ 476
            +P    F ++G+VYCDTC+AGF T  + +I GA ++++CKD+++  V ++  G T + G Y +LV  DH+++ C+  LISS + DC  +         +    N ++  TR  N +GF K +
Sbjct:    5 QPPVSQFHIQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSMLVERDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTVNPLGFFKKE 126          
BLAST of EY744706 vs. ExPASy Swiss-Prot
Match: LIGV1_LIGVU (Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.459e-18
Identity = 41/122 (33.61%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  111 RPNTKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAQ 476
            +P    F ++G+VYCDTC+A F T  + +I GA V+++CKD ++ +V ++  G T + G Y +L+  DH+++ C+  LISS + DC  +         +    N ++  TR  N +GF+K +
Sbjct:    5 QPPVSQFYIQGQVYCDTCRARFITELSEFIPGAGVRLQCKDGENGKVTFTEVGYTKAEGLYNMLIERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTTRTINPLGFLKKE 126          
The following BLAST results are available for this feature:
BLAST of EY744706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSC13_MAIZE2.901e-2645.90Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE... [more]
OLEE1_BETVE1.592e-2443.33Olee1-like protein OS=Betula verrucosa PE=2 SV=1[more]
LAT52_SOLLC1.490e-2240.52Anther-specific protein LAT52 OS=Solanum lycopersi... [more]
PHLB_PHLPR4.334e-2243.22Pollen allergen Phl p 11 OS=Phleum pratense PE=1 S... [more]
LOLB_LOLPR2.809e-2142.37Major pollen allergen Lol p 11 OS=Lolium perenne P... [more]
CHE1_CHEAL6.920e-2039.17Pollen allergen Che a 1 OS=Chenopodium album PE=1 ... [more]
ALL1_OLEEU2.013e-1934.43Major pollen allergen OS=Olea europaea PE=1 SV=2[more]
LIGV1_LIGVU8.459e-1833.61Major pollen allergen Lig v 1 OS=Ligustrum vulgare... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-F02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744706 ID=EY744706; Name=EY744706; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGATTCAATCTTGTTCACCTTCCTTCATCTCCCATAAGACA
ATGGCTAGAACATTGTTGTTGATCGCTCTCTGCGTGCTGCCGGCTCTGGT
GAGCGCGGTCCGGCCCAACACTAAACCGTTCTCGGTTGAAGGACGCGTGT
ACTGCGACACCTGCCAAGCCGGCTTTGAGACCCCCGCTACCACCTACATC
GCCGGTGCCAAGGTTAAGGTTGAATGCAAAGACAGGAAGTCAATGCAAGT
AGTATATAGCAGGGAAGGGAAAACAGACTCAACTGGAACATATAAGATCC
TCGTTTCAGAAGACCATCAGGATCAACTTTGCGATGCTGTCCTCATTAGT
AGCCCCCAGAATGACTGCAAAACAGTTGCCCCAGGGCGTGAGCGTTCCCG
TGTGATCTTGACCAGTTACAACGGCATTTCTTCTGAAACCCGATATGCCA
ATTCAATGGGCTTCATGAAGGCACAGCCCCATGTCTGGCTGTGCTGAGGT
TCTCAGGCTATATCAGGAGGAAGATGTGTAAAGAATGGTGTGGCATGGTT
TTTTTCTATCCCCTTTCCATTTGTTTAAACTTTAGGGTTGCCTTATACTG
CCCCCTTCTATTAAACAAGTGCCCGGAATGCCTGCGCTGCTTCACATGCT
TAACAAGAATTCTCTCAATCTGTTAGATAAAAGAACCCCTCACCCTTTTA
CGTTTAGATTCATATGGCGGCGCCCTTACAGGTTTAAGAATGCGCTTGTA
AATACATACGACCCGGCATGAACCCCTTCCTACCCAAAAAATCTCCCCTA
CCCACACCTCTTCAACCCATGGACACTCCCACCCTTAACCCACCCCACAC
ACCACACAAGAAAAAACGCAACAAACAATTATCCCACCCCCACACCAGCC
AAAAAGCGTGCTACACCCCT
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