EY679510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679510 vs. ExPASy Swiss-Prot
Match: ENDUA_XENLA (Poly(U)-specific endoribonuclease-A OS=Xenopus laevis GN=endou-A PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.172e-29 Identity = 68/162 (41.98%), Postives = 96/162 (59.26%), Query Frame = 2 Query: 38 IKYLHKYLSAKGIVSGNYQDFKRTISSLWFDLYGRG-GTSSCSSAFEHVFVGEIKQAGEQEVSGFHNWLQFYLEEAKGNVDYQGYIFPRRRGQIPDSETQLLTVQFEWNDILKSVSTTLVGVSPEFEIALYTLCFFVGGED---NYVQLGPYPVNIKCYRFG 511 +K H YL K DFK + ++WF LY R G+ S FEHVFVGE K+ QE+ G HNW+QFYL+E + N+DY+GY+ + + + PD + Q+L +QF W +++K V ++ +GVSPEFE ALYT+ F E V+L Y + I R G Sbjct: 115 MKMAHDYLVRKNQAKPTRNDFKVQLYNIWFQLYSRAPGSRPDSCGFEHVFVGESKRG--QEMMGLHNWVQFYLQEKRKNIDYKGYVARQNKSR-PDEDDQVLNLQFNWKEMVKPVGSSFIGVSPEFEFALYTIVFLASQEKMSREVVRLEEYELQIVVNRHG 273
BLAST of EY679510 vs. ExPASy Swiss-Prot
Match: ENDUB_XENLA (Poly(U)-specific endoribonuclease-B OS=Xenopus laevis GN=endou-B PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 5.819e-29 Identity = 66/162 (40.74%), Postives = 96/162 (59.26%), Query Frame = 2 Query: 38 IKYLHKYLSAKGIVSGNYQDFKRTISSLWFDLYGRG-GTSSCSSAFEHVFVGEIKQAGEQEVSGFHNWLQFYLEEAKGNVDYQGYIFPRRRGQIPDSETQLLTVQFEWNDILKSVSTTLVGVSPEFEIALYTLCFFVGG---EDNYVQLGPYPVNIKCYRFG 511 +K H YL K + DFK + S+WF LY R G+ S FEHVFVGE K+ +E+ G HNW+QFYL+E + N+DY+GY+ + + + PD + Q+L +QF W +++K V ++ +GVSPEFE ALYT+ F ++L Y + I R G Sbjct: 115 MKMAHDYLVRKNQAKPSQNDFKVQLYSIWFQLYSRAPGSRPDSCGFEHVFVGESKRG--KEMMGLHNWVQFYLQEKRKNIDYKGYVARQNKSR-PDEDDQVLNLQFSWKEMVKPVGSSFIGVSPEFEFALYTIVFLASQAKMSREVIRLEEYELQIVVNRHG 273
BLAST of EY679510 vs. ExPASy Swiss-Prot
Match: ENDOU_XENTR (Poly(U)-specific endoribonuclease OS=Xenopus tropicalis GN=endou PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.771e-28 Identity = 64/162 (39.51%), Postives = 95/162 (58.64%), Query Frame = 2 Query: 38 IKYLHKYLSAKGIVSGNYQDFKRTISSLWFDLYGRG-GTSSCSSAFEHVFVGEIKQAGEQEVSGFHNWLQFYLEEAKGNVDYQGYIFPRRRGQIPDSETQLLTVQFEWNDILKSVSTTLVGVSPEFEIALYTLCFFVGGED---NYVQLGPYPVNIKCYRFG 511 +K H YL K + DFK + ++WF LY R G S FEHVFVGE K+ +E+ G HNW+QFYL+E + +DY+GY+ + + + PD + Q+L +QF W +++K + ++ +GVSPEFE ALYT+ F E V++ Y + I R G Sbjct: 116 MKIAHDYLVRKNQAKPSRNDFKAQLYTIWFQLYSRAPGQGPDSCGFEHVFVGESKRG--KEIMGLHNWVQFYLQEKRKTIDYKGYVGRQNKSR-PDHDDQVLNLQFSWKEMVKPIGSSFIGVSPEFEFALYTVVFLTSQEKMTREVVRVEEYEMQIVVNRHG 274
BLAST of EY679510 vs. ExPASy Swiss-Prot
Match: PP11_HUMAN (Placental protein 11 OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.170e-27 Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 2 Query: 83 GNYQDFKRTISSLWFDLYGRGGTSSCSSAFEHVFVGEIKQAGEQEVSGFHNWLQFYLEEAKGNVDYQGYIFPRRRGQIPDSETQLLTVQFEWNDILKSVSTTLVGVSPEFEIALYTLCFFV-GGEDNYVQLGPYPVNIKCY 502 G+ Q+F + ++WF LY RG SS FEHVF GE+K+ +V+GFHNW++FYLEE +G VDY +I+ PD +L +QF W+ K V + +G SPEFE ALY+LCF G+ + LG YP+ ++ Y Sbjct: 213 GSEQEFVDDLKNMWFGLYSRGNEEGDSSGFEHVFSGEVKKG---KVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWDSYPD----VLAMQFNWDGYYKEVGSAFIGSSPEFEFALYSLCFIARPGKVCQLSLGGYPLAVRTY 346 The following BLAST results are available for this feature:
BLAST of EY679510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679510 ID=EY679510; Name=EY679510; organism=Citrus sinensis; type=EST; length=1048bpback to top |