EY679504

Overview
NameEY679504
Unique NameEY679504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679504 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.210e-17
Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 1 
Query:   67 LNLLSISNCPSLESFPEGGLPNTSLTSLLISECENLMSLPHQIHKATSLQDLSVSGCPSLMSFPHGGLPPNLISLGIIDCENLIPLSQWELHKLKHLNKYTISWRN 384
            L  L I +CP+LE+FP+GGLP   L+S+L+S C+ L +LP ++   TSL  L +  CP + + P GG P NL +L I  C+ L P  +W L  L++L    I   N
Sbjct: 1217 LESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFIIKCPEIETIPGGGFPSNLRTLCISLCDKLTPRIEWGLRDLENLRNLEIDGGN 1322
The following BLAST results are available for this feature:
BLAST of EY679504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRL21_ARATH1.210e-1741.51Putative disease resistance protein At3g14460 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-H09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679504 ID=EY679504; Name=EY679504; organism=Citrus sinensis; type=EST; length=972bp
CGGACGCGTGGGTGGGATTGTTTGGAGCTTGAGTTCTTGCCTGAGGACAT
GCACAACTTCACTGATCTTAATCTTTTGTCAATAAGTAACTGCCCCAGCC
TTGAGTCTTTTCCAGAAGGAGGGTTGCCAAATACCAGCCTTACATCACTT
TTAATTTCTGAATGTGAAAATCTCATGTCCCTACCCCATCAAATACATAA
GGCCACGTCTCTTCAGGATTTAAGCGTTTCTGGTTGCCCTTCTCTCATGT
CCTTTCCCCATGGGGGTTTGCCTCCTAATCTGATATCACTAGGCATTATT
GATTGTGAGAACCTTATTCCCCTGTCTCAGTGGGAGCTACATAAACTCAA
GCATCTCAACAAATACACCATTTCTTGGCGGAACTCCCAGTGGCTCGAAG
AGTAAATAAAATCCAGCATTGGCTATTGGAAACTCATGTAACGTCTAATC
AGTGGAAATTTCTTCCTCCGTCAAATTGAGGCTGCAGGGAGAATGCTAAG
TAAAAGCCAGAAGTTAACCTCGTCCTTTTTGATAAACAGGGTTAACTCCA
GGAGGGCCACATTTCATTAAATTGCTCCTAAACAAAATGGGATGGGGTGG
AAAGAATTGGTACCTTTTTAGTATTAATGGAGAAAATTGTATTGTTGGCC
CCGGGAATACTTATCCCGAAACACGATTTTGAAGAGGCGGTCGCCATCGA
AGTCGTTATATATATTTTCTATCTGCGTTTTATCTTACTGTAAACTCATT
GCTCCATATATTTGGATAAAAGATTAACGATTAAAAAGAAAATTGAAATC
AATGTGTTGTGTTATATAGTATTCTTCCCTAATCTATCACCGCTAAAAGC
ATGAGAAACACCACTCATGTTTTTCTCTTCACTCTTATCCTATTTTGTGA
AATAATAGTACAATTTATAATAAAAAAAACACTCCGAATGCATATGTTTG
TATTTTCATGAACCAACATCAG
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