EY679503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679503 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.080e-19 Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 181 MKGGKSKSDTRNA--KLSVNXXXXXXXXXXXXXXX----DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSV 378 MKGGKSK++++ A KL+VN DPNKPKRP SAFFVFMEEFR+ + K+HP+NK+V Sbjct: 1 MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAV 72 HSP 2 Score: 46.2098 bits (108), Expect = 2.080e-19 Identity = 19/32 (59.38%), Postives = 28/32 (87.50%), Query Frame = 3 Query: 414 KSMSEADKAPYVG*GKKRRVDYEKDMKNYNRK 509 K+MS+A+KAPYV +KR+V+YEK+M+ YN+K Sbjct: 84 KTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKK 115 HSP 3 Score: 22.3274 bits (46), Expect = 2.080e-19 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 380 AAVGKAGGEKWE 415 +AVGKA G KW+ Sbjct: 73 SAVGKAAGAKWK 84
BLAST of EY679503 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.678e-18 Identity = 41/73 (56.16%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 181 MKGGKSKSDTRNA--KLSVNXXXXXXXXXXXXXXX-----DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSV 378 MKGGKSK +++ A KL+VN DPNKPKRP SAFFVFM +FREQYKKDHP NKSV Sbjct: 1 MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSV 73 HSP 2 Score: 35.039 bits (79), Expect = 4.678e-18 Identity = 15/32 (46.88%), Postives = 23/32 (71.88%), Query Frame = 3 Query: 414 KSMSEADKAPYVG*GKKRRVDYEKDMKNYNRK 509 KS+SE +KAPYV K++ +YE ++ YN+K Sbjct: 85 KSLSEEEKAPYVDRALKKKEEYEITLQAYNKK 116 HSP 3 Score: 23.0978 bits (48), Expect = 4.678e-18 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 380 AAVGKAGGEKWE 415 AAVGKA GE+W+ Sbjct: 74 AAVGKACGEEWK 85
BLAST of EY679503 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.840e-17 Identity = 37/66 (56.06%), Postives = 43/66 (65.15%), Query Frame = 1 Query: 181 MKGGKSKSDTRNAKLSVNXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSV 378 MKGGKSK+ + N KL+V DPNKPKRP SAFFVFME+FR+ YK+ HP NKSV Sbjct: 1 MKGGKSKAKSDN-KLAVKKQAADTKKTKKAVK-DPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSV 64 HSP 2 Score: 36.5798 bits (83), Expect = 4.840e-17 Identity = 13/32 (40.62%), Postives = 25/32 (78.12%), Query Frame = 3 Query: 414 KSMSEADKAPYVG*GKKRRVDYEKDMKNYNRK 509 K ++ A+KAP++ +KR+ +YEK+++ YN+K Sbjct: 76 KQLTAAEKAPFISKAEKRKQEYEKNLQAYNKK 107 HSP 3 Score: 25.409 bits (54), Expect = 4.840e-17 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 380 AAVGKAGGEKWE 415 A VGKAGG+KW+ Sbjct: 65 AVVGKAGGDKWK 76 The following BLAST results are available for this feature:
BLAST of EY679503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679503 ID=EY679503; Name=EY679503; organism=Citrus sinensis; type=EST; length=1056bpback to top |