EY679500

Overview
NameEY679500
Unique NameEY679500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1001
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 5.414e-61
Identity = 118/136 (86.76%), Postives = 126/136 (92.65%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAES 467
            YLFKIVIIGDSAVGKSNLL+RYARNEFNP+SKATIGVEFQTQSM IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDITR +TF+++ RWLDEL THSDTTVA ML+G  CDLESIR  S EEGKSLAES
Sbjct:   11 YLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAES 146
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.575e-60
Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            YLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQSMEI+GKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDITRRTTF+S+ RWLDELK HSDTTVA MLVG  CDLE+IR  S EEGK+LAE
Sbjct:   11 YLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAE 145
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.529e-47
Identity = 90/135 (66.67%), Postives = 111/135 (82.22%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            YLFK+V+IGDS VGKSNLLSR+ +NEFN  SK+TIGVEF T+++++DGK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TRR TF+++ RWL ELK H+D  +  MLVG   DL  +    TE+GKS AE
Sbjct:   12 YLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAE 146
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.608e-47
Identity = 90/135 (66.67%), Postives = 110/135 (81.48%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            YLFK+V+IGDS VGKSNLLSR+ RNEFN  SK+TIGVEF T+S+ IDGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TTF++  RWL EL+ H+D  +  ML+G   DL  +   STE+GK+ AE
Sbjct:   12 YLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAE 146
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 7.589e-47
Identity = 90/135 (66.67%), Postives = 110/135 (81.48%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            YLFK+V+IGDS VGKSNLLSR++RNEFN  SK+TIGVEF T+S+ +D K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDITR  TF+++ RWL EL+ H+D  +  MLVG   DL  +R  STE+ K+ AE
Sbjct:   13 YLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAE 147
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 1.294e-46
Identity = 88/135 (65.19%), Postives = 111/135 (82.22%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            YLFK+V+IGDS VGKSNLLSR+ RNEF+  SK+TIGVEF T+S+++DGK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR +TF+++ RWL EL+ H+D  +  MLVG   DL  +    T+EGK+ AE
Sbjct:   13 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAE 147
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 3.766e-46
Identity = 88/135 (65.19%), Postives = 112/135 (82.96%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            Y+FK+V+IGDSAVGKS LL+R+ARNEFN  SKATIGVEFQT+++ ID + VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYDIT+R +FD ++RWL+EL+ H+D  +  ML+G   DL ++R   TE+ K  AE
Sbjct:   17 YVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAE 151
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.766e-46
Identity = 87/135 (64.44%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            YLFKIV+IGDS VGKSN+LSR+ RNEF   SK+TIGVEF T++++++GK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIT+R TFD++ RWL EL+ H+D+ +  M+ G   DL+ +R  S E+G++LAE
Sbjct:   11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAE 145
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.919e-46
Identity = 88/135 (65.19%), Postives = 112/135 (82.96%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            Y+FK+V+IGDSAVGKS +L+R+ARNEF+  SK+TIGVEFQT+++ ID K VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYDIT+R TFD I RWL+EL+ H+D  +  +L+G  CDL + R+  TE+ K  AE
Sbjct:   16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAE 150
[Close]
BLAST of EY679500 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.096e-45
Identity = 87/135 (64.44%), Postives = 109/135 (80.74%), Query Frame = 3 
Query:   60 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVAWMLVGE*CDLESIRNGSTEEGKSLAE 464
            YLFK+V+IGDS VGKSNLLSR+ +NEFN  SK+TIGVEF T+++ +D K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TRR TF++ +RWL EL+ H+D  +  ML+G   DL  +    TE+GKS AE
Sbjct:   12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAE 146
The following BLAST results are available for this feature:
BLAST of EY679500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARA4_ARATH5.414e-6186.76Ras-related protein ARA-4 OS=Arabidopsis thaliana ... [more]
ARA1_ARATH1.575e-6086.67Ras-related protein ARA-1 OS=Arabidopsis thaliana ... [more]
RAA1B_ARATH1.529e-4766.67Ras-related protein RABA1b OS=Arabidopsis thaliana... [more]
RB11E_LOTJA2.608e-4766.67Ras-related protein Rab11E OS=Lotus japonicus GN=R... [more]
RB11B_TOBAC7.589e-4766.67Ras-related protein Rab11B OS=Nicotiana tabacum GN... [more]
RIC2_ORYSJ1.294e-4665.19Ras-related protein RIC2 OS=Oryza sativa subsp. ja... [more]
RGP1_ORYSJ3.766e-4665.19Ras-related protein RGP1 OS=Oryza sativa subsp. ja... [more]
RB2BV_BETVU3.766e-4664.44Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB... [more]
RB11A_LOTJA4.919e-4665.19Ras-related protein Rab11A OS=Lotus japonicus GN=R... [more]
RB11D_LOTJA1.096e-4564.44Ras-related protein Rab11D OS=Lotus japonicus GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-H05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679500 ID=EY679500; Name=EY679500; organism=Citrus sinensis; type=EST; length=1001bp
GAATTCAATTCAAAACGATGTCGTCGTCGGATGAAGAAGGAGGAGGAGGA
GGGGAGGAGTACTTGTTCAAGATCGTGATAATCGGCGACTCGGCGGTGGG
GAAATCGAACCTACTGTCTCGTTACGCTCGGAACGAGTTCAATCCTCACT
CGAAGGCGACAATTGGAGTCGAGTTTCAAACGCAGAGCATGGAGATCGAC
GGCAAGGAAGTCAAGGCTCAGATTTGGGACACCGCCGGCCAGGAGCGCTT
CCGCGCCGTCACTTCTGCTTACTACAGAGGCGCCGTCGGTGCTCTCATTG
TTTACGACATTACCAGGCGTACCACTTTTGACAGCATCTCTCGCTGGCTC
GATGAGCTCAAGACTCATTCTGATACCACTGTGGCATGGATGCTGGTCGG
GGAATAATGTGATTTGGAAAGTATCCGGAATGGGAGCACTGAAGAAGGTA
AAAGCCTTGCAGAATCATAAGGGGTGGTTTTCTATGGATACTTCGGCATG
GGACTCCGAGAATGGTTAAAATGGCTTTGAAAATGGCTATCAAATAGATT
TTCTGCTAAGGGCTGTTGGGAAGGTCATGGATTTTTGAAATTTTTCTAAA
GTGGAATTTTTCTTCTCTATCGGGGTAACCTCTCTGTTTAAATTGGTAAA
TCGGATGGATTCTAAGTCAAATTCATCCGATTATATTTTTCTTTGAGTGT
GTAAGGGTGGAACTTCATTTCCTTATATTTCTTATTACTTCCATATAAAC
TTTAATAACTCGCTTGAACGACTAGTTCTTCTCATTTCCTTGTTATTTCT
ACGAATTTTAAATTGGATGTTTCTATTTTTTATATATTAGATTTTTGGGT
ATTTCACTTGTTTTTTTGTTCCTCTTTACACATTATTGGGGAGCTTCCTC
TTTCTATTACGTGTCTATTGGTTCATTATATATTTTCAGAGCACACTATC
ATTATAGAGGGGGCGTTTGAGATTTACTTTTTACTGAGAATATATGCTGA
T
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