EY679491

Overview
NameEY679491
Unique NameEY679491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length982
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_VITVI (Histone H3.3 OS=Vitis vinifera PE=2 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_TOBAC (Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_PINPS (Histone H3.3 OS=Pinus pinaster PE=2 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_ORYSJ (Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_011536 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_ORYCO (Histone H3.3 OS=Oryza coarctata PE=2 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_MEDSA (Histone H3.3 OS=Medicago sativa PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_LOLTE (Histone H3.3 OS=Lolium temulentum PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_LOLMU (Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
[Close]
BLAST of EY679491 vs. ExPASy Swiss-Prot
Match: H33_GOSHI (Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 1.136e-55
Identity = 112/117 (95.73%), Postives = 112/117 (95.73%), Query Frame = 1 
Query:   46 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSPAVLALQEGTEAYLVGHFEDTNLCAIPAKR 396
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQE  EAYLVG FEDTNLCAI AKR
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 117
The following BLAST results are available for this feature:
BLAST of EY679491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H33_VITVI1.136e-5595.73Histone H3.3 OS=Vitis vinifera PE=2 SV=3[more]
H33_TOBAC1.136e-5595.73Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1[more]
H33_PINPS1.136e-5595.73Histone H3.3 OS=Pinus pinaster PE=2 SV=3[more]
H33_ORYSJ1.136e-5595.73Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3... [more]
H33_ORYSI1.136e-5595.73Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_... [more]
H33_ORYCO1.136e-5595.73Histone H3.3 OS=Oryza coarctata PE=2 SV=3[more]
H33_MEDSA1.136e-5595.73Histone H3.3 OS=Medicago sativa PE=1 SV=2[more]
H33_LOLTE1.136e-5595.73Histone H3.3 OS=Lolium temulentum PE=2 SV=2[more]
H33_LOLMU1.136e-5595.73Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=... [more]
H33_GOSHI1.136e-5595.73Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-G08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679491 ID=EY679491; Name=EY679491; organism=Citrus sinensis; type=EST; length=982bp
CCCGCGTCCGGAGAAATTGAGTAGAGGAGTTGAATAAACTCAGAGATGGC
CCGTACCAAGCAAACTGCACGTAAGTCAACCGGAGGAAAGGCTCCTAGGA
AGCAACTTGCTACCAAGGCCGCCCGTAAGTCTGCGCCCACCACCGGTGGT
GTTAAGAAGCCTCATCGTTACCGTCCTGGAACCGTCGCCCTTCGAGAAAT
TCGCAAGTACCAGAAGAGTACCGAGCTGCTTATCAGGAAACTCCCATTCC
AGAGACTTGTTCGTGAAATTGCTCAGGACTTTAAGACTGATCTGCGTTTC
CAGAGCCCTGCAGTGCTGGCTCTGCAGGAGGGAACGGAGGCTTACCTTGT
TGGTCACTTCGAGGACACTAACCTCTGCGCCATTCCTGCTAAGCGGTGCT
CCAATTATGCCCTAGGACATTTAGTTTGACCGTAAGATCCGTGGAAAGGC
GTGCTTTAACGAAATTGTTGGTATGCTCTCTTTTTTAATGATCGGATAGG
CAAGGGGGCCTTTGAAATGGGATTATGTTTGTTCGTGTGAGATTTTTTAA
GAGGTGTTTATTTATATTAATATGTTTTTGATAAGTGCAATTATATTGAT
ACTAATGAAAATGAATCAAAATTAATGTATTTAAATATTATTATTTAAAA
TATTAAACGTAAATAATACCATATAAATGAAAAAAAAGAATTAAGAAAAA
AAATAACGATTATAACAATAGAATTAATAATGTTTAATAGATATTGAACA
CCATCCTCGATAATATTATTAATAGACAAGATATCGAGGTTGTGGACCAG
TTTGTTTATATATTGTGTATTAGTATAGCGTTATAATTCATTTTTGAAGA
ACCTAGAGATATAACTCATACAGAGTTAGAAGTATCTTTCTGATACATTT
TTTTCTATTGAAATAGAAGATATTATAAGATTAATGATACAATTATAGAT
TCGAGGGATAATAATAAAGTTTTTTTCAGTAC
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