EY679490

Overview
NameEY679490
Unique NameEY679490
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1025
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: IDND_VITVI (L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSVIVT00012394001 PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 6.167e-52
Identity = 95/114 (83.33%), Postives = 110/114 (96.49%), Query Frame = 2
Query:    2 EMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 343
            EMKFF +PP +GSLANQVVHP++LCFKLPDNVSLEEGAMCEPLSVG+HACRRAN+GPETNVLIMG+GPIGLVTML ARAFGAPRIV+VDVDD RL++AK+LGAD+I++VSTN+Q
Sbjct:  127 EMKFFGSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQ 240          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: DHSO_BOVIN (Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 1.059e-27
Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 2
Query:   11 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            F ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV++L A+A GA ++V+ D+   RLS AKE+GAD I+++S
Sbjct:  118 FCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQIS 224          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: DHSO_SHEEP (Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.384e-27
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 2
Query:   11 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            F ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV +L A+A GA ++V+ D+   RLS AKE+GAD I+++S
Sbjct:  116 FCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEIS 222          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: DHSO_PONAB (Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.866e-27
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 2
Query:   11 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            F ATPP  G+L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+   RLS AKE+GAD ++++S
Sbjct:  119 FCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQIS 225          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: DHSO_HUMAN (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 1.530e-26
Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 2
Query:   11 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            F ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+   RLS AKE+GAD ++++S
Sbjct:  119 FCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQIS 225          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: DHSO_RAT (Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4)

HSP 1 Score: 119.783 bits (299), Expect = 2.609e-26
Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 2
Query:   11 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            F ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG+VT+L A+A GA ++V++D+   RL+ AKE+GAD  ++V+
Sbjct:  119 FCATPPDDGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVA 225          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: DHSO_MACFA (Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 7.592e-26
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 2
Query:   11 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 331
            F ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+V++L A+A GA ++V+ D+   RLS AKE+GAD ++++S
Sbjct:  119 FCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQIS 225          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: DHSO_MOUSE (Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 1.295e-25
Identity = 55/106 (51.89%), Postives = 77/106 (72.64%), Query Frame = 2
Query:   11 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 328
            F ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G+VT+L A+A GA ++V+ D+   RL+ AKE+GAD  ++V
Sbjct:  119 FCATPPDDGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQV 224          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.527e-21
Identity = 48/109 (44.04%), Postives = 73/109 (66.97%), Query Frame = 2
Query:    2 EMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 328
            E ++ ++    G+L     H AD C KLPDN+++EEGA  +PL++ +HAC RA I   + ++I+GAGPIG++  + A+A GA +I++ DV   RL  A ELGADN++ V
Sbjct:  111 EPRYCSSMGAPGNLCRYYKHVADFCHKLPDNLTMEEGAAVQPLAIVIHACNRAKITLGSKIVILGAGPIGILCAMSAKAMGASKIILTDVVQSRLDAALELGADNVLLV 219          
BLAST of EY679490 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 2.527e-21
Identity = 45/109 (41.28%), Postives = 71/109 (65.14%), Query Frame = 2
Query:    2 EMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 328
            +++F ATPPV G+    +    D  F +PD++S EE A+ EP SVG+HA  R  + P + + IMG GP+GL+ +  A+AFGA  I++ D++  RL  AK++GA +I+ +
Sbjct:  116 DVQFLATPPVDGAFVQYIKMRQDFVFLIPDSLSYEEAALIEPFSVGIHAAARTKLQPGSTIAIMGMGPVGLMAVAAAKAFGAGTIIVTDLEPLRLEAAKKMGATHIINI 224          
The following BLAST results are available for this feature:
BLAST of EY679490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
IDND_VITVI6.167e-5283.33L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSV... [more]
DHSO_BOVIN1.059e-2756.07Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 ... [more]
DHSO_SHEEP1.384e-2756.07Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 ... [more]
DHSO_PONAB6.866e-2755.14Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=... [more]
DHSO_HUMAN1.530e-2654.21Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
DHSO_RAT2.609e-2652.34Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sor... [more]
DHSO_MACFA7.592e-2653.27Sorbitol dehydrogenase OS=Macaca fascicularis GN=S... [more]
DHSO_MOUSE1.295e-2551.89Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=... [more]
DHSO_BOMMO2.527e-2144.04Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]
DHSO_BACSU2.527e-2141.28Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-G07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679490 ID=EY679490; Name=EY679490; organism=Citrus sinensis; type=EST; length=1025bp
AGAGATGAAATTTTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATC
AGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGC
CTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTG
CCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAG
GGCCCATAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCT
AGAATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGA
ACTTGGTGCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGTATATT
ACTGCCCATTGCCCAGCAGAAGAGTTTAGAAAAGTAAAAGACATTCTCAA
AATCTTCATGCTCGCAATCCTTCCCTTTCTCTTAATCATCATAACAACCA
TGTTCTGTTCAACCAACTTCTGTTGCATTAAAGACCCTTGTTCCAACTTC
CTCAAGTTCTTTTTTTGGTTCTCAGTAACTTTTCTGTTCTCCTGTTTGAA
AGTTGACCACTCCTAATTCTGCATTTTTTCTTGTTTATCGAAGTAAAAGG
GGACCTTGGACTTTTGGTTCGTTTTGGAAAAATTGGTCCTGGTGCTCCCC
TCCCCTTTGGTTTTTTTTTCGCTTGGAATATCCCCGCTTTGAATTTGAGG
ATTTTTGCGGGAGCTTGCTTAAAAAATGGGAAAAAAATACCCTAAGCCCC
TGGGGGACCAGGATTATAATGTTGACTTTTAATTTGGGCGGGGCTTTATC
AATAACCTTGTTAACAAAGACTTAGAAGGGCAACCTCTGGGGAGGGGGAA
AAAATTTTTCCCCTCTGGGGAGTAGGGGGTTTTTTTTAATATTTGATTTG
TATCACTCCTCCACCCCTGCGTGTGGTTGCGAAAAAGGGAGGGGGGGGGG
AAGGTGGGGGGTGGGGGGGGTGGATTTTTTTGCAACATACCACAAAAAAC
CCACCCTTTCGCCCACCCTACTTGT
back to top