EY744694

Overview
NameEY744694
Unique NameEY744694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744694 vs. ExPASy Swiss-Prot
Match: FB60_ARATH (F-box protein At1g55000 OS=Arabidopsis thaliana GN=At1g55000 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.413e-47
Identity = 93/184 (50.54%), Postives = 130/184 (70.65%), Query Frame = 2 
Query:  149 ALACPDTLRLILSKLSVTDLARASCVCRAWSSVASDNNMIVLAFMAPWKLKEVVGMPLNGSFWRDNGIGKFAISHRLARGDTVASLAVKYSVQVMDIKRLNNMMSDHGIYSRERXXXXXXXXXXXXDGICYIEFDTYAKKGSTRALSGKGHRKKSLVVG*KRGTSVLA--RKKITTPLKKNMEI 694
            AL C DTL +I  KL+V DLARASCVC+ W+SVA++++++V AF APW++KE+VG P + SFWRDNGI KFAISHR+ RGD+V SLAVKY+VQVMDIKRLNNMMSDHGIYSR+R            +  CY+E D YAK+           +++  V G  + +++ A  ++++   L+++M++
Sbjct:    2 ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASVSFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPISNPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPVPGTNQQSNLSADGKRRLIESLRRSMQV 185
The following BLAST results are available for this feature:
BLAST of EY744694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FB60_ARATH3.413e-4750.54F-box protein At1g55000 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-D11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744694 ID=EY744694; Name=EY744694; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGGCTGTGGCGACCAAAACGACGCCGAAGAAGAGCTCCAAA
ACCATCTCCTGTCGTCCTCCTCATCCTCAGCCTCAGCCTCAGCCTCAAGC
TTCACCGACCCATCAACCGTAATCTCTCCAATGAACTCCCACTTCAGCGC
CCTCGCCTGCCCCGATACGCTGCGTTTAATCCTGTCAAAACTCAGCGTCA
CGGACCTCGCACGCGCCAGCTGCGTCTGCAGAGCGTGGAGCTCCGTCGCG
TCGGATAACAACATGATCGTCCTCGCATTCATGGCTCCATGGAAGCTTAA
AGAAGTTGTGGGAATGCCCTTGAATGGATCATTCTGGAGAGATAATGGGA
TTGGAAAGTTCGCCATTTCGCATCGTTTAGCGCGTGGAGATACGGTCGCT
AGCCTCGCCGTTAAGTACTCCGTTCAGGTTATGGACATTAAACGGTTAAA
TAATATGATGAGTGATCATGGCATATATTCGAGGGAGAGGTTATTGATCC
CTATAAGCAGTCCAGAACTTCTTATAGATGGAATATGCTACATAGAGTTT
GACACCTATGCGAAAAAGGGAAGTACCAGGGCTCTATCTGGAAAGGGGCA
CCGGAAAAAAAGCCTAGTTGTTGGCTGAAAAAGGGGAACCTCTGTTCTGG
CAAGAAAAAAAATAACCACCCCCTTGAAGAAAAACATGGAAATTTAATGA
ATGAAACGGTCCCAAAATCCGTGTCCTATTTCCAATGGGAAACCCGGGGG
GAGGGCCTCCCCAGAAATTTTCGTTGGTGAGATTAGAATGGGGAAAGGGG
CAGGGGGGCTTGGGGCTTTAAAGGGAAAATCCGAACAACTCGCCGG
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