EY679487

Overview
NameEY679487
Unique NameEY679487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3PC_MAGLI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.110e-20
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            K+KI INGFGRIGRLVARV LQRDDVELVAVNDPFI++DYMTY+FKY+SVHGQ
Sbjct:    5 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQ 57

HSP 2 Score: 24.6386 bits (52), Expect = 1.110e-20
Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 1 
Query:  265 HLDLKVKEIYFLLISVNPVTVYRV 336
            H +LKVK+   LL    PVTV+ V
Sbjct:   60 HHELKVKDSKTLLFGEKPVTVFGV 83
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3PC_ARATH (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.183e-19
Identity = 44/53 (83.02%), Postives = 51/53 (96.23%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            K++I INGFGRIGRLVARV LQRDDVELVAVNDPFI+++YMTY+FKY+SVHGQ
Sbjct:    5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQ 57

HSP 2 Score: 23.483 bits (49), Expect = 1.183e-19
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 1 
Query:  265 HLDLKVKEIYFLLISVNPVTVYRV 336
            H +LK+K+   LL    PVTV+ +
Sbjct:   60 HNELKIKDEKTLLFGEKPVTVFGI 83
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3PC_SINAL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.183e-19
Identity = 44/53 (83.02%), Postives = 51/53 (96.23%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            K+KI INGFGRIGRLVARV LQR+DVELVAVNDPFI+++YMTY+FKY+SVHGQ
Sbjct:    5 KIKIGINGFGRIGRLVARVILQRNDVELVAVNDPFITTEYMTYMFKYDSVHGQ 57

HSP 2 Score: 23.8682 bits (50), Expect = 1.183e-19
Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 1 
Query:  265 HLDLKVKEIYFLLISVNPVTVYRV 336
            H +LKVK+   LL    PVTV+ +
Sbjct:   60 HNELKVKDEKTLLFGEKPVTVFGI 83
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.539e-19
Identity = 43/53 (81.13%), Postives = 50/53 (94.34%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            K+KI INGFGRIGRLVARV LQ +DVELVAVNDPFI++DYMTY+FKY++VHGQ
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQ 55

HSP 2 Score: 25.7942 bits (55), Expect = 1.539e-19
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1 
Query:  265 HLDLKVKEIYFLLISVNPVTVYRV 336
            H D+K+K+   LL+   PVTV+ +
Sbjct:   58 HSDIKIKDSKTLLLGEKPVTVFGI 81
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.539e-19
Identity = 43/53 (81.13%), Postives = 50/53 (94.34%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            K+KI INGFGRIGRLVARV LQ +DVELVAVNDPFI++DYMTY+FKY++VHGQ
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQ 55

HSP 2 Score: 25.7942 bits (55), Expect = 1.539e-19
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1 
Query:  265 HLDLKVKEIYFLLISVNPVTVYRV 336
            H D+K+K+   LL+   PVTV+ +
Sbjct:   58 HSDIKIKDSKTLLLGEKPVTVFGI 81
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            KVK+ INGFGRIGRLVARV LQRDD ELVAVNDPFIS+DYMTY+FKY+SVHGQ
Sbjct:    3 KVKVGINGFGRIGRLVARVILQRDDCELVAVNDPFISTDYMTYMFKYDSVHGQ 55
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3P_ATRNU (Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.599e-19
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            KVKI INGFGRIGRLVARV LQ DD ELVA+NDPFI++DYMTY+FKY+SVHGQ
Sbjct:    3 KVKIGINGFGRIGRLVARVILQSDDCELVAINDPFITTDYMTYMFKYDSVHGQ 55

HSP 2 Score: 23.483 bits (49), Expect = 2.599e-19
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 1 
Query:  265 HLDLKVKEIYFLLISVNPVTVY 330
            H +LKVK+   LL    PVTV+
Sbjct:   58 HHELKVKDEKTLLFGERPVTVF 79
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3PC_RANAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ranunculus acris GN=GAPC PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.603e-19
Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            K+KI INGFGRIGRLVARV L RDDVELVAVNDPFI++DYMTY+FKY++VHGQ
Sbjct:    4 KIKIGINGFGRIGRLVARVALARDDVELVAVNDPFITTDYMTYMFKYDTVHGQ 56

HSP 2 Score: 23.483 bits (49), Expect = 2.603e-19
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 1 
Query:  265 HLDLKVKEIYFLLISVNPVTVY 330
            H +LKVK+   LL    PVTV+
Sbjct:   59 HHELKVKDEKTLLFGEKPVTVF 80
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.604e-19
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            K+KI INGFGRIGRLVARV LQRDDVELVAVNDPFIS +YMTY+FKY+SVHGQ
Sbjct:    3 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISVEYMTYMFKYDSVHGQ 55
[Close]
BLAST of EY679487 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.604e-19
Identity = 45/53 (84.91%), Postives = 51/53 (96.23%), Query Frame = 2 
Query:  101 KVKI*INGFGRIGRLVARVFLQRDDVELVAVNDPFISSDYMTYLFKYNSVHGQ 259
            K+KI INGFGRIGRLVARV L+RDDVELVAVNDPFI++DYMTY+FKY+SVHGQ
Sbjct:    4 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQ 56
The following BLAST results are available for this feature:
BLAST of EY679487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
G3PC_MAGLI1.110e-2086.79Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ARATH1.183e-1983.02Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_SINAL1.183e-1983.02Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSJ1.539e-1981.13Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSI1.539e-1981.13Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR1.582e-1986.79Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ATRNU2.599e-1983.02Glyceraldehyde-3-phosphate dehydrogenase OS=Atripl... [more]
G3PC_RANAC2.603e-1983.02Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETHY4.604e-1986.79Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PEA4.604e-1984.91Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-G04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679487 ID=EY679487; Name=EY679487; organism=Citrus sinensis; type=EST; length=934bp
TGGGGGCTGCGGGTCCGGTCGGAATTTCCGGGTCGACCCCGCGTCCGACT
TTCTTCCCACTCTTTCCCCCTTCTATTTCATCTCTCGAGAATCATGGTGG
AAGGTCAAGATCTGAATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGC
GAGAGTCTTCTTGCAGAGGGACGATGTTGAACTCGTTGCTGTTAATGATC
CCTTTATCTCATCTGATTACATGACATACTTGTTTAAGTACAACAGTGTT
CACGGCCAGTGAATCACCTTGATTTGAAAGTTAAAGAAATTTATTTTCTT
CTCATTAGTGTGAATCCAGTAACTGTTTACCGAGTAATCATTATAACAGA
TATTCCCCAATTGCTACTTCTTTTTATTATTTTTATAGTTTATTTTAATT
TTAAAAGGTTAAAATTATATTACTTCCCCCTTCAGTGTCGTTTTATTATT
TCGTTAGTGTTGCTTTTTCTTAGATTTTGTTTTCTTAGTGTTCTAGGCGG
AGTCAATAGTACTGAAAAGCTAACTAAATATTAAAAATTTGTATTGTATA
TATTGAATATATGAATTATGACCAAGTCAATTATTAATATATAATACATA
TCTTATCAATGCCTAATTAAAGAATGTGCACTACGATATTAAGCTCTATT
GTGTTTTCCAGTAATTCTAATCAGTTTAACTACTTCACTCGTTTTCATTT
CCTCTTTACATAGTAACATTGATTATAATATATTATTAATAACGAGTTAT
ATATATTTTACTACAATAAAACTATGAAATAATAACTTATAAAAGTCAGA
ATACCTAATTGATATATCATTAAGTTGGTATGTAGAAATATTCGGTTATC
AAATACTTGAATTGTAAATCTAATTCATGTTATTTTTACCAGCAATGTAT
AATTCTGTCTTACTTGGTTCATACGCGGTTACCT
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