EY679481

Overview
NameEY679481
Unique NameEY679481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length997
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679481 vs. ExPASy Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.359e-16
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 3 
Query:  153 LKLGACAGVLGT--NVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKC 380
            LKLG CA VL    NV +GSPP   CC++L GL  +EAA+CLC AIKAN+L   LN P  + L+L+ C + +P GF+C
Sbjct:   59 LKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALSLVLNNCGKQVPNGFEC 136
[Close]
BLAST of EY679481 vs. ExPASy Swiss-Prot
Match: CCDP_MAIZE (Cortical cell-delineating protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.608e-15
Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 3 
Query:  153 LKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKC 380
            LKL  CA VLG  V VG P Y QCC +L GL +++AALCLC AIKANVL I LN P ++  IL+ C R  P  F C
Sbjct:   53 LKLKVCAKVLGL-VKVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLGIHLNVPLSLNFILNNCGRICPEDFTC 127
The following BLAST results are available for this feature:
BLAST of EY679481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
14KD_DAUCA2.359e-1652.5614 kDa proline-rich protein DC2.15 OS=Daucus carot... [more]
CCDP_MAIZE2.608e-1556.58Cortical cell-delineating protein OS=Zea mays PE=2... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-F09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679481 ID=EY679481; Name=EY679481; organism=Citrus sinensis; type=EST; length=997bp
GCTTCCACAACAAGCTTGCTGCTGCCATTTTTGTGCTCTCTGTTCTTTTA
TCCACAACAATGTCCAGTGCTTGTGGCTCGTGCAACCCTTCACCACACAG
GCCGCCGGCCGCTACGCCTCCGCCGGCTACGGCATATTGCCCCACGAACA
CGTTGAAGCTTGGAGCTTGTGCAGGAGTTCTTGGAACTAATGTTGCTGTA
GGAAGCCCACCTTACAGCCAGTGCTGTGCTATACTTGGCGGCTTGGGTGA
AGTCGAAGCTGCGCTGTGTCTTTGCCTTGCTATAAAAGCCAATGTTCTTG
CGATTGAATTGAACTGGCCAACTAATATTGGGCTCATCCTTAGTCTTTGC
AACAGGCCAATTCCCGCAGGCTTCAAATGTGCATAAGAAGCTGAAATGCA
TATTTTCTAGTAAATTAATGCTCCAATTAACTAGGAAAGAAGATTTTTTT
TTTTTTTTTTTTTTTTTTGGTGGGCCTAATTCCAGGACCCGGGGACAGTT
CATTGGTTTTAAATTTTGCTTAAAACTAGGGAAGAAACTGGTTTTGGCCC
AATGCTAGTTTGGAGAGGGGTGGAGCCCATAATTGGGGAGAATTAAAATA
CATAATTAAAAACTTTTCCTATTTTAAAGAAAATATAAAAAAAAAAAAAA
CAAACAAAGAATCAAAAATCCAAAGCATCCACACAAAATCTGAACATTAC
ACCTAAAATAAGAGAAAAAAAAAAGAAAAACACGAAAAAAAAATATGATA
ATGACCGAATACAAAGAGAACATAAAATTTGCAAAAGTCTGGTTTGTATG
ATTAAACATAAAATTTTTTTTACAACTTTTTAAAACGTAATACGAATATG
CGGGTAGGAGCTGAAGTACTTGTAATTAGAATATGATATAAATAGAAGGG
TGATTTCATAGAGGGTTAAATATATTTGTTTATTAATAAGTGAATAGCAC
TGATTCACGAAACCAAATTTACTCAAGAAACATTAACCTATCTAGAA
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