EY679480

Overview
NameEY679480
Unique NameEY679480
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length997
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.824e-23
Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 1
Query:   34 VQNSSVGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVAVAM 255
            VQ+SSVGAC+EVGK+G+EEEVE LKRDKNVLMQ+LVRLRQ QQAT+ QL  VGQ+VQV EQR + MMS +A A+
Sbjct:  131 VQSSSVGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAV 204          
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.447e-21
Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1
Query:   19 STHASVQNSSVGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVAVAM 255
            S H++ QNSSV AC+EVGK+GLEEEVE LKRDKNVLMQ+LVRLRQ QQ+TD QL T+ QR+Q  E R + +MS +A A+
Sbjct:  140 SQHSNGQNSSVSACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQTMVQRLQGMENRQQQLMSFLAKAV 218          
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HFA1E_ARATH (Heat stress transcription factor A-1e OS=Arabidopsis thaliana GN=HSFA1E PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 4.174e-21
Identity = 51/74 (68.92%), Postives = 61/74 (82.43%), Query Frame = 1
Query:   34 VQNSSVGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVAVAM 255
            VQ+SSVGAC+EVGK+GLEEEVE L+RDKNVLMQ+LVRLRQ QQ T+  L  VGQ+V V EQR + MMS +A A+
Sbjct:  126 VQHSSVGACVEVGKFGLEEEVERLQRDKNVLMQELVRLRQQQQVTEHHLQNVGQKVHVMEQRQQQMMSFLAKAV 199          
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HSFA1_ORYSJ (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.028e-19
Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 1
Query:   49 VGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVAVAM 255
            V AC+EVGK+G+EEE+E+LKRDKNVLMQ+LVRLRQ QQ TD QL T+G+R+Q  EQR + MMS +A AM
Sbjct:  146 VPACVEVGKFGMEEEIEMLKRDKNVLMQELVRLRQQQQTTDHQLQTLGKRLQGMEQRQQQMMSFLAKAM 214          
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HSF8_SOLLC (Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.754e-19
Identity = 51/84 (60.71%), Postives = 62/84 (73.81%), Query Frame = 1
Query:    4 GNSTGSTHASVQNSSVGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVAVAM 255
            GN+         ++SVGAC+EVGK+GLEEEVE LKRDKNVLMQ+LVRLRQ QQATD QL  + QR+Q  E R + MMS +A A+
Sbjct:  144 GNAQQQMQPPGHSASVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQLQGMVQRLQGMELRQQQMMSFLAKAV 227          
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HSF8_SOLPE (Heat shock factor protein HSF8 OS=Solanum peruvianum GN=HSF8 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.137e-18
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 1
Query:   40 NSSVGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVAVAM 255
            ++SVGAC+EVGK+GLEEEVE LKRDKNVLMQ+LVRLRQ QQ+TD QL  + QR+Q  E R + MMS +A A+
Sbjct:  158 SASVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQGMVQRLQGMELRQQQMMSFLAKAV 229          
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HFA1A_ARATH (Heat stress transcription factor A-1a OS=Arabidopsis thaliana GN=HSFA1A PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.095e-16
Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 1
Query:   43 SSVGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVAVAM 255
            +++ +C+EVGK+GLEEEVE LKRDKNVLMQ+LV+LRQ QQ TD +L  + + +QV EQR + +MS +A A+
Sbjct:  168 AALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIMSFLAKAV 238          
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.784e-14
Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 1
Query:   31 SVQNSSVGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVA 246
            S+     GACIE+G YG+EEE+E LKRDKNVLM ++V+LRQ QQ+T  Q+  +G++++  E++   MMS +A
Sbjct:  127 SMNQQGSGACIEIGYYGMEEELERLKRDKNVLMTEIVKLRQQQQSTRNQIIAMGEKIETQERKQVQMMSFLA 198          
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HFA6B_ARATH (Heat stress transcription factor A-6b OS=Arabidopsis thaliana GN=HSFA6b PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.076e-12
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 1
Query:    7 NSTGSTHASVQNSSVGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVAVAM 255
            N      +S Q S    CIEVG+YGL+ E++ L+RDK VLM +LVRLRQ QQ+T   L  + ++++ TE + + MMS +A AM
Sbjct:  158 NQMQQPQSSEQQSLDNFCIEVGRYGLDGEMDSLRRDKQVLMMELVRLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAM 240          
BLAST of EY679480 vs. ExPASy Swiss-Prot
Match: HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica GN=HSFA2C PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.890e-12
Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 1
Query:   37 QNSSVGACIEVGKYGLEEEVEILKRDKNVLMQDLVRLRQHQQATDRQLHTVGQRVQVTEQRAETMMSIVAVAM 255
            Q  S+ +C+EVG++G EEE++ LKRDKN+L+ ++V+LRQ QQAT   +  +  R++  EQ+   MM  +A AM
Sbjct:  142 QQQSLTSCLEVGEFGFEEEIDRLKRDKNILITEVVKLRQEQQATKDHVKAMEDRLRAAEQKQVQMMGFLARAM 214          
The following BLAST results are available for this feature:
BLAST of EY679480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
HFA1B_ARATH5.824e-2372.97Heat stress transcription factor A-1b OS=Arabidops... [more]
HFA1D_ARATH2.447e-2165.82Heat stress transcription factor A-1d OS=Arabidops... [more]
HFA1E_ARATH4.174e-2168.92Heat stress transcription factor A-1e OS=Arabidops... [more]
HSFA1_ORYSJ1.028e-1968.12Heat stress transcription factor A-1 OS=Oryza sati... [more]
HSF8_SOLLC1.754e-1960.71Heat shock factor protein HSF8 OS=Solanum lycopers... [more]
HSF8_SOLPE1.137e-1866.67Heat shock factor protein HSF8 OS=Solanum peruvian... [more]
HFA1A_ARATH3.095e-1657.75Heat stress transcription factor A-1a OS=Arabidops... [more]
HSF30_SOLPE3.784e-1450.00Heat shock factor protein HSF30 OS=Solanum peruvia... [more]
HFA6B_ARATH2.076e-1245.78Heat stress transcription factor A-6b OS=Arabidops... [more]
HFA2C_ORYSJ7.890e-1245.21Heat stress transcription factor A-2c OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-057-F08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679480 ID=EY679480; Name=EY679480; organism=Citrus sinensis; type=EST; length=997bp
CCCGGGAATTCCACGGGGTCGACCCACGCGTCCGTTCAGAACTCATCAGT
TGGGGCATGTATTGAAGTAGGGAAGTATGGACTTGAAGAAGAGGTTGAAA
TACTTAAGCGCGACAAGAATGTTCTCATGCAAGATCTTGTTAGGTTGAGG
CAGCATCAGCAAGCTACGGATCGTCAATTGCATACTGTTGGACAGCGTGT
ACAGGTGACGGAACAACGAGCAGAAACAATGATGTCTATTGTTGCCGTGG
CCATGCTTTGACTCAATAGTCTTAAGTCTACAATGTATCTCGTTTGATAA
GAAAATAAAATTATATATATATGATTGCAAATATTGAACACGATAATGCA
TTTTGATGAAATAAAATAAACATGTTGGTGTTTAAGGCTATTGGTCACAC
AACGGGATAAATAACCTATATATGAGAAAATACAATCTCAATCGAGATAA
ATAAAGCGCGGTGGGGAAATTCCTACAAAATTAAGCGCGTTCTCTACAGA
AATATGATTTAAAGCTTATATAAGAATAGTACGTATTATTCACAATGCCC
CCTATGACACCCACACGCTCCACGGAATACATTCGCATTAAACATTCTAT
GATTCTTACTTAATCTATTTTTCAATACCCATAACCCATAACTAACAATA
CCCTAACAAAAGTCGTGCTATCTTGCCAGATAACTTAGAAGTAGAAGCAG
AACTGAATGTTGATGAGAATAAATAGAATGATATCAATGTTACCATGTGA
GCTTGAATATTTTTACTGATGTGATAAATAGATGTTCCAAGAGGTTTTCG
TGTATTAACTAGAACAGATAAATCAAGAATAGTTTTAGGTATTTTAGTGA
TACTATGTTGTATAGACAATCATTTAGCGATGCATTTATATATTACACAT
TTTATTATTTTTATACTTGTATCTTCCATTACTAAGCTCTCACTCATCGA
TATCCCTCTGTATNATTTCAATGAACAAGATAATTATATTTATATGA
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