EY744683

Overview
NameEY744683
Unique NameEY744683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744683 vs. ExPASy Swiss-Prot
Match: TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 55/209 (26.32%), Postives = 103/209 (49.28%), Query Frame = 3 
Query:    9 PVASFNTIQGDCVAIYLRENQRLLNFISGIHGRVNLALDLWSSNQSVGYAVLTGHFIDGDWNLHHRVLNVVMVPSPDSDVAFNQALASCLSDWRLENKLLTLTLDRSFSNE-TINGNLRGFLSVKNPFMLNCQLIKGNCYARVISRLAQDALGAIWETVDKIRASVKYVKTSDTHEEKFLELKERLQVPNTKELFIDDQTKWNTTYHML 632
            P+ S  T +   + +YL E ++L   +  +  R +  +D+W+S Q+  Y  +T H+ID DW L  R++    V    +    +Q   + +  W +E KL  L+LD + +NE  ++  +       +  + +       C   +++ +A+D L  I  T++KI+A V  VK+S    E+ ++      +  +K +  D  T+WN+TY ML
Sbjct:  208 PIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLML 416
[Close]
BLAST of EY744683 vs. ExPASy Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 55/209 (26.32%), Postives = 103/209 (49.28%), Query Frame = 3 
Query:    9 PVASFNTIQGDCVAIYLRENQRLLNFISGIHGRVNLALDLWSSNQSVGYAVLTGHFIDGDWNLHHRVLNVVMVPSPDSDVAFNQALASCLSDWRLENKLLTLTLDRSFSNE-TINGNLRGFLSVKNPFMLNCQLIKGNCYARVISRLAQDALGAIWETVDKIRASVKYVKTSDTHEEKFLELKERLQVPNTKELFIDDQTKWNTTYHML 632
            P+ S  T +   + +YL E ++L   +  +  R +  +D+W+S Q+  Y  +T H+ID DW L  R++    V    +    +Q   + +  W +E KL  L+LD + +NE  ++  +       +  + +       C   +++ +A+D L  I  T++KI+A V  VK+S    E+ ++      +  +K +  D  T+WN+TY ML
Sbjct:  263 PIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLML 471
The following BLAST results are available for this feature:
BLAST of EY744683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TRAC9_MAIZE2.762e-2126.32Putative AC9 transposase OS=Zea mays PE=4 SV=1[more]
TRA1_MAIZE2.762e-2126.32Putative AC transposase OS=Zea mays PE=2 SV=2[more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-C12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744683 ID=EY744683; Name=EY744683; organism=Citrus sinensis; type=EST; length=907bp
CCACGCGTCCGGTGGCAAGCTTCAACACCATCCAGGGGGATTGTGTGGCA
ATATATCTAAGGGAGAACCAAAGACTTTTGAATTTTATTAGTGGAATTCA
TGGACGAGTCAACCTTGCATTGGATTTGTGGTCTTCAAATCAATCTGTAG
GCTATGCAGTCCTAACTGGGCATTTTATTGATGGTGATTGGAACTTGCAT
CATCGTGTTCTTAATGTGGTTATGGTTCCATCCCCTGACTCCGATGTTGC
CTTCAATCAAGCGCTCGCGTCTTGCCTATCTGATTGGCGTCTAGAGAACA
AGTTGCTTACCCTTACTCTTGATCGGTCCTTCTCAAATGAAACAATAAAT
GGAAATCTCAGAGGCTTCCTTTCTGTCAAAAATCCATTTATGCTAAATTG
TCAACTGATAAAAGGGAATTGCTATGCTCGTGTTATTAGTCGCCTTGCAC
AAGATGCTCTAGGAGCAATCTGGGAAACTGTCGATAAAATTCGTGCCAGC
GTAAAGTATGTCAAGACTTCAGATACTCATGAAGAGAAGTTTCTTGAGCT
GAAGGAACGACTTCAAGTCCCTAATACGAAGGAACTTTTTATTGATGACC
AAACTAAATGGAACACAACTTACCATATGTTGGTGGCTGCTCATGAAATA
AAGGAAAGTATTTGGTTTGTTGGAAAATTTTTGATCCAAAATAAAAAAAA
ACCAACCCCCAAAATGGGATTGATGGAAAACAGGGTAAAAATTCCTCGTG
AAATACTTGAAATTATTTTCTTTTAAGGGCGGCAAACCTTTTTAAACCCT
CTCCCAAATTATTCCCAATGGCCAAGTGGGTTCCTCCCTTAAAATGGGAC
AAAAAATTTCCGGGGAAAAAAATGAACCACCAACCACCCCCTTAAAGGGA
AAAAACC
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