EY744679

Overview
NameEY744679
Unique NameEY744679
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length989
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCL11_ARATH (Cyclin-L1-1 OS=Arabidopsis thaliana GN=CYCL1-1 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.450e-50
Identity = 95/119 (79.83%), Postives = 106/119 (89.08%), Query Frame = 2
Query:    2 TLETPLELRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKYIPVCKDGTSFTFSSKTVDSQPQSTPKEVLQSSPQA 358
            TLETP ELRQEAWNLAND LRTTLCVRF+SEVVACGVVYAAARRFQ+PLPENPPWWKAFDA+KS IDEVCRVLAHLYSLPKA+YI VCKDG  FTFSS++ +SQ QS  K++L  + +A
Sbjct:  164 TLETPPELRQEAWNLANDSLRTTLCVRFRSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSSIDEVCRVLAHLYSLPKAQYISVCKDGKPFTFSSRSGNSQGQSATKDLLPGAGEA 282          
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCL11_ORYSJ (Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.254e-38
Identity = 77/115 (66.96%), Postives = 89/115 (77.39%), Query Frame = 2
Query:    2 TLETPLELRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKYIPVCKDGTSFTFSSKTVDSQPQSTPKEVLQS 346
            TLE P EL QEAWNLAND LRTTLCVRFKSEVVACGVVYAAARR  +PLPE+PPWW  FDA+++GI EVCRVLAHLYSLPK++YI V KD  SFT    +  +  + +P   + S
Sbjct:  164 TLEAP-ELTQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRHGVPLPEDPPWWNVFDADEAGIQEVCRVLAHLYSLPKSQYIQVYKDNDSFTHRRTSDTNASKESPATTVAS 277          
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCNL1_DANRE (Cyclin-L1 OS=Danio rerio GN=ccnl1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.190e-13
Identity = 37/74 (50.00%), Postives = 43/74 (58.11%), Query Frame = 2
Query:   23 LRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPK 244
            L Q AWN  ND LRT+  VRF+ E +AC  +Y AAR  QIPLP  P W+  F A K  I E+C     LYS  K
Sbjct:  199 LVQTAWNYMNDALRTSAFVRFEPETIACACIYLAARVLQIPLPSKPHWFLLFGATKEDIKEICINTMKLYSREK 272          
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCNL1_RAT (Cyclin-L1 OS=Rattus norvegicus GN=Ccnl1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.200e-12
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 2
Query:   23 LRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKY 253
            L Q AWN  ND LRT + VRF+ E +AC  +Y AAR  QIPLP  P W+  F   +  I E+C     LY+  K  Y
Sbjct:  221 LVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY 297          
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCNL1_MOUSE (Cyclin-L1 OS=Mus musculus GN=Ccnl1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.200e-12
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 2
Query:   23 LRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKY 253
            L Q AWN  ND LRT + VRF+ E +AC  +Y AAR  QIPLP  P W+  F   +  I E+C     LY+  K  Y
Sbjct:  226 LVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY 302          
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCNL1_HUMAN (Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.200e-12
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 2
Query:   23 LRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKY 253
            L Q AWN  ND LRT + VRF+ E +AC  +Y AAR  QIPLP  P W+  F   +  I E+C     LY+  K  Y
Sbjct:  220 LVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY 296          
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCNL2_XENTR (Cyclin-L2 OS=Xenopus tropicalis GN=ccnl2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.492e-12
Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 2
Query:   23 LRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKA 247
            L Q +WN  ND LRT + VRF  E +AC  ++ AAR  +IPLP  P W+  F A +  I E+C  +  LY+  KA
Sbjct:  193 LVQTSWNYMNDSLRTDVFVRFNPETIACACIFLAARTLEIPLPNRPHWFYLFGASEEDIKEICLQILRLYTRKKA 267          
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCNL2_RAT (Cyclin-L2 OS=Rattus norvegicus GN=Ccnl2 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.492e-12
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 2
Query:   23 LRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPK 244
            L Q AWN  ND LRT + VRF+ E +AC  +Y AAR  +IPLP  P W+  F A +  I E+C  +  LY+  K
Sbjct:  213 LVQTAWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICFKILQLYTRKK 286          
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCNL2_MOUSE (Cyclin-L2 OS=Mus musculus GN=Ccnl2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.492e-12
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 2
Query:   23 LRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPK 244
            L Q AWN  ND LRT + VRF+ E +AC  +Y AAR  +IPLP  P W+  F A +  I E+C  +  LY+  K
Sbjct:  213 LVQTAWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICFKILQLYTRKK 286          
BLAST of EY744679 vs. ExPASy Swiss-Prot
Match: CCNL1_XENLA (Cyclin-L1 OS=Xenopus laevis GN=ccnl1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.561e-12
Identity = 34/77 (44.16%), Postives = 43/77 (55.84%), Query Frame = 2
Query:   23 LRQEAWNLANDPLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKY 253
            L Q AWN  ND LRT + VRF +E +AC  +Y AAR  Q+ LP  P W+  F A +  I ++C     LYS  K  Y
Sbjct:  200 LVQTAWNYMNDCLRTNVFVRFDAETIACACIYLAARALQLSLPNRPHWFLLFGATEENIQDICITTLRLYSRIKPNY 276          
The following BLAST results are available for this feature:
BLAST of EY744679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CCL11_ARATH1.450e-5079.83Cyclin-L1-1 OS=Arabidopsis thaliana GN=CYCL1-1 PE=... [more]
CCL11_ORYSJ8.254e-3866.96Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCNL1_DANRE9.190e-1350.00Cyclin-L1 OS=Danio rerio GN=ccnl1 PE=1 SV=1[more]
CCNL1_RAT1.200e-1245.45Cyclin-L1 OS=Rattus norvegicus GN=Ccnl1 PE=1 SV=1[more]
CCNL1_MOUSE1.200e-1245.45Cyclin-L1 OS=Mus musculus GN=Ccnl1 PE=2 SV=1[more]
CCNL1_HUMAN1.200e-1245.45Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1[more]
CCNL2_XENTR3.492e-1244.00Cyclin-L2 OS=Xenopus tropicalis GN=ccnl2 PE=2 SV=1[more]
CCNL2_RAT3.492e-1245.95Cyclin-L2 OS=Rattus norvegicus GN=Ccnl2 PE=2 SV=2[more]
CCNL2_MOUSE3.492e-1245.95Cyclin-L2 OS=Mus musculus GN=Ccnl2 PE=1 SV=1[more]
CCNL1_XENLA4.561e-1244.16Cyclin-L1 OS=Xenopus laevis GN=ccnl1 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-C08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744679 ID=EY744679; Name=EY744679; organism=Citrus sinensis; type=EST; length=989bp
CACCCTTGAGACACCCCTAGAATTGAGACAGGAAGCTTGGAATCTAGCAA
ATGATCCTCTGCGCACAACTTTGTGTGTCCGATTCAAGAGCGAGGTCGTG
GCTTGTGGGGTTGTATATGCTGCTGCTCGTAGGTTCCAGATACCCCTTCC
TGAGAATCCGCCTTGGTGGAAAGCATTTGATGCAGAGAAATCTGGGATTG
ATGAAGTTTGTAGGGTTCTGGCTCACCTGTACAGCCTTCCCAAGGCAAAG
TATATACCAGTCTGTAAGGATGGAACATCATTTACATTTTCCAGCAAGAC
TGTGGATTCACAACCTCAGTCAACTCCGAAGGAAGTTCTGCAAAGCAGCC
CACAAGCTAATAACCATACCACTTTTCCCATTGAAGCTTTAGTACCCATT
AATCCTGAATCCGGTGGATCCAAGGTAAAGGCAGCCACTTGATCGACTGA
AGGATTCTAAGAAGAGTGATGATGAATCCAAGAGCATGCCCCTCTGATGG
GGAGGCCAGAGAAAAACCTGTGCAGAGACCAAGTCTGATCACAAGACAGA
AGGAAGTGGAGAAAGGAACAGGACAGAAAACGGGAGAGGGACATAAAGAG
AGATATACATCGGGAAAAAAACCGGGAAACGGGAAAAAGAAAAACCCCGG
ATCGTGACAGGGGAAAAAAATCTGTACCGGGGAAACAAATTCCACATGAC
ACCCGATCAAAATAACGGTGCGGAGGGTATCGCTTCCTAGCGCACAAAAT
GAGGGAAAACGGGGAGGAAATTCTCCGAAAAAATACAGACAATATCCTCC
CAACTCCGAGGATGTGGCAAACACCAAACGTCTCTTTCTTCTTTTCGCAC
GGGGAACACAAACAACGCCCCCTGACAACCATCTCTTTTAACCTACCCCA
CCCCCTTTCCGCGCGACCTTATTCGACGGAGCTGTGCGCTGTGTGGTGCG
CACCTCCGCGGCCACATCAAAACTCACCCCAAATACACT
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