EY744677

Overview
NameEY744677
Unique NameEY744677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744677 vs. ExPASy Swiss-Prot
Match: UBP27_ARATH (Ubiquitin carboxyl-terminal hydrolase 27 OS=Arabidopsis thaliana GN=UBP27 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.947e-19
Identity = 63/163 (38.65%), Postives = 97/163 (59.51%), Query Frame = 1 
Query:  217 KWVSASGLLGILGVAGFVLALKKDAKIGNLSGFSWLSEKENRL-EKLCLVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECE-----EPDEDLPLTVTLASLLKKVMFSW*NKACIKSRKKGMLEIGNFIFKTSI*TTNQEAQKPFLHLMPTFKENFL 687
            +WVS     G+LGVAGFV A ++     NL+     S +E    +   LVPGLQNLGNNCFLNVILQALASC  F  FLQ V+ +       E +E LPLT  L++LL++ + +  ++  + + +K M+ + ++    ++ T+ Q+A +  LHL+ + +E  +
Sbjct:   25 QWVSHLSFAGLLGVAGFVFA-QQHGLFRNLNNLKLFSGREKDSGDDSFLVPGLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQLPLTFALSALLQE-LGTVGSRRSVSNPRKVMVTLTDYAKNFNL-TSQQDAAEALLHLISSLQEEIV 184
The following BLAST results are available for this feature:
BLAST of EY744677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UBP27_ARATH1.947e-1938.65Ubiquitin carboxyl-terminal hydrolase 27 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-C06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744677 ID=EY744677; Name=EY744677; organism=Citrus sinensis; type=EST; length=896bp
AAGGTACTGCAAAATTTCTTCACTATTATTATATTTCAATCCTTCATTAA
AATTACAAGCTCCCTGATTCCTTTTCCCTTCTCCTCTAAATCTTGATTCT
CTTACAATTCAAAATATCCCATAAATTGGTTTTATATTACAATGAAATGT
GAAGGAGCCACAAGCGTAAGAGCACTTGTATTACAGAGTCTCAAAAATGG
ATTTTTGCCTCATATGAAGTGGGTTTCAGCTTCTGGTTTGCTTGGTATTT
TGGGTGTCGCTGGTTTTGTCTTGGCTTTGAAAAAAGATGCCAAAATTGGA
AACTTGAGTGGCTTTTCATGGCTATCTGAGAAAGAGAATCGTTTGGAGAA
GTTGTGCTTAGTACCTGGATTGCAGAATCTTGGAAATAATTGTTTTTTGA
ATGTTATATTGCAGGCTCTAGCTAGTTGCACATGCTTTCTACCTTTCCTT
CAAAAGGTTATGGGGGAGTGTGAGGAACCAGATGAAGACTTGCCGCTTAC
AGTAACTTTGGCTTCCTTGTTAAAAAAAGTTATGTTTAGTTGGTGAAACA
AGGCTTGTATTAAATCCCGCAAAAAAGGAATGCTTGAAATTGGAAACTTT
ATATTCAAAACTTCAATCTAAACAACCAACCAGGAAGCACAAAAACCCTT
TCTTCATCTTATGCCCACTTTTAAGGAAAATTTTTTGGAGGCTTAATGCC
CAATGAAAAGGTTCTCTGGGGGGGATGCTTTTGAACCTGCAAGTGGCCAA
ATCCTTCCTTTAACACGGGGGGGGGCCTCAAGGGTGTCCCAAAAAATGAG
GGCCCCCTCTTTTGCGCCCCTTTGAAAGGAACTCCTTGTATACACGCGCA
CTCCACCTTTTTTTTTCAGTATATTCCCTCTCCTCCACCCCCGGGA
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