EY744669

Overview
NameEY744669
Unique NameEY744669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744669_ssr721 microsatellite EY744669_ssr721:721..735. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS92_ARATH (40S ribosomal protein S9-2 OS=Arabidopsis thaliana GN=RPS9C PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.614e-90
Identity = 163/178 (91.57%), Postives = 174/178 (97.75%), Query Frame = 2 
Query:   38 MVHVSFYRNYGKTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRRN 571
            MV+V FYRNYGKTFKKPRRPYEKERLDAEL+LVGEYGLRCKRELWRVQY LSRIRNAAR+LLTLDEKNPRRIFEGEALLRRM+RYG L+E+QNKLDYVLALTVENFLERRLQT+VFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSF+VRV+SQK ++FSLTSPFGGGRPGRVKRRN
Sbjct:    1 MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARELLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRN 178
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS91_ARATH (40S ribosomal protein S9-1 OS=Arabidopsis thaliana GN=RPS9B PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 5.741e-88
Identity = 159/178 (89.33%), Postives = 173/178 (97.19%), Query Frame = 2 
Query:   38 MVHVSFYRNYGKTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRRN 571
            MVHV +YRNYGKTFK PRRPYEKERLD+EL+LVGEYGLR KRELWRVQY+LSRIRNAARDLLTLDEK+PRRIFEGEALLRRM+RYG L+ESQNKLDYVLALTVENFLERRLQT+VFKSGMAKSIHH+RVLIRQRHIRVG+QLVNIPSF+VR+DSQK I+F+LTSPFGGGRPGRVKRRN
Sbjct:    1 MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARDLLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRN 178
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS9_PODAN (40S ribosomal protein S9 OS=Podospora anserina GN=RPS9 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.869e-68
Identity = 126/170 (74.12%), Postives = 151/170 (88.82%), Query Frame = 2 
Query:   59 RNYGKTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRR 568
            R+Y KT K PRRP+E  RLD+EL+LVGEYGLR KRE+WRV   LS+IR AAR+LLTLDEK+P+R+FEG AL+RR+ R G L+ES+ KLDYVLAL  E+FLERRLQTLV+K G+AKSIHHARVLIRQRHIRVG+Q+VN+PSFVVR+DSQK I+F+LTSPFGGGRPGRV+R+
Sbjct:    4 RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRK 173
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS9_DROME (40S ribosomal protein S9 OS=Drosophila melanogaster GN=RpS9 PE=1 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.920e-67
Identity = 124/171 (72.51%), Postives = 151/171 (88.30%), Query Frame = 2 
Query:   65 YGKTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRRNIQ 577
            + KT+  PRRPYEK RLD EL+++GEYGLR KRE+WRV+YAL++IR AAR+LLTLDEK+ +R+F+G ALLRR+ R G L+ES+ KLDYVL L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSFVVR+DSQK I+FSL SPFGGGRPGRVKR+N++
Sbjct:   10 FSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLK 180
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS9_RAT (40S ribosomal protein S9 OS=Rattus norvegicus GN=Rps9 PE=1 SV=4)

HSP 1 Score: 252.292 bits (643), Expect = 2.773e-66
Identity = 121/167 (72.46%), Postives = 147/167 (88.02%), Query Frame = 2 
Query:   71 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRRN 571
            KT+  PRRP+EK RLD EL+L+GEYGLR KRE+WRV++ L++IR AAR+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQK I+FSL SP+GGGRPGRVKR+N
Sbjct:   11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS9_PAPAN (40S ribosomal protein S9 OS=Papio anubis GN=RPS9 PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.773e-66
Identity = 121/167 (72.46%), Postives = 147/167 (88.02%), Query Frame = 2 
Query:   71 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRRN 571
            KT+  PRRP+EK RLD EL+L+GEYGLR KRE+WRV++ L++IR AAR+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQK I+FSL SP+GGGRPGRVKR+N
Sbjct:   11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS9_MOUSE (40S ribosomal protein S9 OS=Mus musculus GN=Rps9 PE=2 SV=3)

HSP 1 Score: 252.292 bits (643), Expect = 2.773e-66
Identity = 121/167 (72.46%), Postives = 147/167 (88.02%), Query Frame = 2 
Query:   71 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRRN 571
            KT+  PRRP+EK RLD EL+L+GEYGLR KRE+WRV++ L++IR AAR+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQK I+FSL SP+GGGRPGRVKR+N
Sbjct:   11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS9_HUMAN (40S ribosomal protein S9 OS=Homo sapiens GN=RPS9 PE=1 SV=3)

HSP 1 Score: 252.292 bits (643), Expect = 2.773e-66
Identity = 121/167 (72.46%), Postives = 147/167 (88.02%), Query Frame = 2 
Query:   71 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRRN 571
            KT+  PRRP+EK RLD EL+L+GEYGLR KRE+WRV++ L++IR AAR+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQK I+FSL SP+GGGRPGRVKR+N
Sbjct:   11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS9_BOVIN (40S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.773e-66
Identity = 121/167 (72.46%), Postives = 147/167 (88.02%), Query Frame = 2 
Query:   71 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRRN 571
            KT+  PRRP+EK RLD EL+L+GEYGLR KRE+WRV++ L++IR AAR+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VNIPSF+VR+DSQK I+FSL SP+GGGRPGRVKR+N
Sbjct:   11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177
[Close]
BLAST of EY744669 vs. ExPASy Swiss-Prot
Match: RS9B_SCHPO (40S ribosomal protein S9-B OS=Schizosaccharomyces pombe GN=rps9b PE=1 SV=3)

HSP 1 Score: 248.825 bits (634), Expect = 3.066e-65
Identity = 119/173 (68.79%), Postives = 148/173 (85.55%), Query Frame = 2 
Query:   59 RNYGKTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKPIEFSLTSPFGGGRPGRVKRRNIQ 577
            R   KT+K PRRP+E  RLDAEL+L GEYGLR K E+WRV   LS+IR AAR+LLTLDEK+P+R+FEG A++RR+ R G L+ES+ KLDYVLAL +E+FLERRLQT VFK G+AKSIHHARVLI QRHIRVG+Q+VN+PSFVVR+D+QK I+F+L+SP+GGGRPGR KR+ ++
Sbjct:    6 RKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDAQKHIDFALSSPYGGGRPGRCKRKRLR 178
The following BLAST results are available for this feature:
BLAST of EY744669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
RS92_ARATH1.614e-9091.5740S ribosomal protein S9-2 OS=Arabidopsis thaliana... [more]
RS91_ARATH5.741e-8889.3340S ribosomal protein S9-1 OS=Arabidopsis thaliana... [more]
RS9_PODAN3.869e-6874.1240S ribosomal protein S9 OS=Podospora anserina GN=... [more]
RS9_DROME1.920e-6772.5140S ribosomal protein S9 OS=Drosophila melanogaste... [more]
RS9_RAT2.773e-6672.4640S ribosomal protein S9 OS=Rattus norvegicus GN=R... [more]
RS9_PAPAN2.773e-6672.4640S ribosomal protein S9 OS=Papio anubis GN=RPS9 P... [more]
RS9_MOUSE2.773e-6672.4640S ribosomal protein S9 OS=Mus musculus GN=Rps9 P... [more]
RS9_HUMAN2.773e-6672.4640S ribosomal protein S9 OS=Homo sapiens GN=RPS9 P... [more]
RS9_BOVIN2.773e-6672.4640S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=... [more]
RS9B_SCHPO3.066e-6568.7940S ribosomal protein S9-B OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-010-B10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744669 ID=EY744669; Name=EY744669; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGGAGGGTAGCACCAGCGGCGCGCAAAGATGGTGCACGTTT
CATTCTACCGCAACTATGGGAAAACCTTCAAGAAGCCAAGACGTCCCTAT
GAGAAGGAGCGATTGGATGCTGAGTTGAGACTTGTGGGAGAGTATGGGCT
TCGCTGCAAGAGGGAACTCTGGAGGGTTCAATATGCACTGAGCCGCATCC
GAAATGCTGCGAGGGATCTTCTCACTCTCGATGAGAAGAACCCACGTCGT
ATTTTCGAGGGTGAGGCTCTTCTCAGGAGGATGCACAGGTACGGCTTCTT
GGAAGAGAGCCAGAACAAGCTTGATTATGTGTTGGCCCTCACTGTGGAGA
ACTTTCTTGAGCGTCGTCTCCAGACCCTTGTGTTCAAGAGTGGCATGGCT
AAGTCAATTCACCATGCTCGAGTGCTCATCAGGCAGAGGCACATTAGGGT
TGGAAGGCAGCTTGTCAACATTCCCTCATTTGTAGTGAGGGTTGATTCCC
AGAAGCCCATTGAATTCTCACTGACNAGTCCATTCGGAGGTGGCCGCCCT
GGAAGAGTGAAGAGAAGGAACATCCAGGCTGCTGCCAAAAAGGCCGCAGG
TGGAAATGGAGATGAAGAGGGTGAAGAATAAATTACCTGGGGGAACGGAT
AGTTTTTTTATGGGTTCCAGTAGGAATTCTGGGCGGAACTTTTCAAGTGG
GACTTTTCTTCCTCCAGTTTTTTTGTTTTGTTTTGCGAATTTTCTTTCTA
TAAAAGGAGGGGGTTTGCTTTGCTTTGGTGCGCCTACCTTAGAAATAAAC
GAATAAAAAAGGGAATCTTCCCGCCCCGCGGAAAGTTTCTTTTTTTCGAA
AATAAACTTCGGGGCTTATAAGGGGGGGTCTTGGAGACCCCCCCTTC
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