EY679367

Overview
NameEY679367
Unique NameEY679367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length989
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.236e-25
Identity = 78/167 (46.71%), Postives = 88/167 (52.69%), Query Frame = 3
Query:  324 STTGVSPGESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKK 824
            S TGV+PGE TGATMS          TNF DG  DGPDSMGFGPLVPTESERSLMERVR ELKHELKQ                           +EKIVDI+E+ILRKRRA                  +  PYPTE  + ++      LQ K  N   F N+RK+
Sbjct:  267 SLTGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGY-------------------------KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARL-VQETGLQLKQINN-WFINQRKR 406          
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.182e-22
Identity = 73/167 (43.71%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  324 STTGVSPGESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKK 824
            S TGVSPGE T ATMS           N FD  ++G DSMGFGPL+PTESERSLMERVR ELKHELKQ                           +EKIVDI+E+ILRKRRA                  +  PYPTE  + ++      LQ K  N   F N+RK+
Sbjct:  270 SLTGVSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGY-------------------------KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARL-VQETGLQLKQINN-WFINQRKR 409          
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 1.415e-21
Identity = 75/167 (44.91%), Postives = 86/167 (51.50%), Query Frame = 3
Query:  324 STTGVSPGESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKK 824
            S TGVSPGE TGATMS           + FDGSLDG   +GFGPLVPTESERSLMERVR ELKHELKQ                           +EKIVDI+E+ILRKRRA                  +  PYPTE  + ++      LQ K  N   F N+RK+
Sbjct:  229 SFTGVSPGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQGY-------------------------KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARL-VQETGLQLKQINN-WFINQRKR 365          
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.043e-20
Identity = 76/188 (40.43%), Postives = 90/188 (47.87%), Query Frame = 3
Query:  324 STTGVSPGESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKKELGLDTPFLFPLP*KKKTQKG 887
            S TGVSPGE  GATMS           N FDG LD    +GFGPL+PTESERSLMERVR ELKHELKQ                           +EKIVDI+E+ILRKRRA                  +  PYPTE  + ++      LQ K  N   F N+RK+    +      L  K+K+  G
Sbjct:  265 SLTGVSPGEGMGATMSDDEDEQVESDANMFDGGLD---VLGFGPLIPTESERSLMERVRQELKHELKQGY-------------------------KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARL-VQETGLQLKQINN-WFINQRKRNWHSNPSSSTVLKNKRKSNAG 422          
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.550e-20
Identity = 71/167 (42.51%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  324 STTGVSPGESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKK 824
            S TG SPGE TGATMS           N +D SLDG D+MGFG  +PTESERSLMERVR ELKHELKQ                           +EK++DI+E+ILRKRRA                  A  PYPTE  + ++      LQ K  N   F N+RK+
Sbjct:  212 SLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGY-------------------------KEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARL-VQETGLQLKQINN-WFINQRKR 349          
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: KNOS2_ORYSJ (Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica GN=HOS58 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.943e-20
Identity = 70/167 (41.92%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  324 STTGVSPGESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKK 824
            S TG SPGE TGATMS           N FDG+ DG D MGFGPL+ TE ERSL+ERVRHELK+ELKQ                           +EK+VDI+E+ILRKRRA                  +  PYPTE  + ++      LQ K  N   F N+RK+
Sbjct:  146 SLTGASPGEGTGATMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGY-------------------------KEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARL-VQETGLQLKQINN-WFINQRKR 284          
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: KNAT5_ARATH (Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 7.762e-20
Identity = 77/191 (40.31%), Postives = 92/191 (48.17%), Query Frame = 3
Query:  324 STTGVSPGESTGATMSXXXXXXXXXX-TNFFDGSLDGPDS-MGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKKELGLDTPFLFPLP*KKKTQKGR 890
            S TGVSP ES G TMS            N FDGSLDG D  MGFGPLVPTE ERSLMERV+ ELKHELKQ                           +EKIVDI+E+I+RKRRA                  +  PYPTE  + K+      LQ K  N   F N+RK+    ++     L   K+ + G+
Sbjct:  219 SLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQG-------------------------FKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKL-VQETGLQLKQINN-WFINQRKRNWNSNSSTSSTLTKNKRKRTGK 382          
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.464e-18
Identity = 69/167 (41.32%), Postives = 83/167 (49.70%), Query Frame = 3
Query:  324 STTGVSPGESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKK 824
            S TG SP E +GATMS          +N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELKHELKQ                           REK+VDI+E+ILRKRRA                  +  PYPTE  + ++      LQ K  N   F N+RK+
Sbjct:  155 SLTGASPREGSGATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGY-------------------------REKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARL-VQETGLQLKQINN-WFINQRKR 293          
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.312e-14
Identity = 62/165 (37.58%), Postives = 75/165 (45.45%), Query Frame = 3
Query:  330 TGVSPGESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKK 824
            TG +  E TGATMS              D   DG D MGFGPL+PT+SERSLMERVR ELK ELKQ                           + +I D++E+ILRKRRA                  +  PYPTE  + K+      LQ K  N   F N+RK+
Sbjct:  160 TGATLEEGTGATMSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQG-------------------------FKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKL-VEETGLQLKQINN-WFINQRKR 297          
BLAST of EY679367 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.561e-12
Identity = 65/186 (34.95%), Postives = 83/186 (44.62%), Query Frame = 3
Query:  324 STTGVSPGESTGATMSXXXXXXXXXXTNFFDGS--LDGPDSMGFGPLVPTESERSLMERVRHELKHELKQVRVQNHLHW*TTRMIVQLMCFLLLRVTREKIVDIKEKILRKRRAENCQVTPPHF*ILGGCPKANGPYPTEGKQGKMGAGNRALQ*KPNNQLGFKNKRKKELGLDTPFLFPLP*KKK 875
            S TG + GE +GATMS          ++   G     G D  GFGPL+PTESERSLMERVR ELK ELKQ                           + +I D++E+I+RKRRA                     PYPTE  + K+      LQ K  N   F N+RK+    ++  L  L  K+K
Sbjct:  132 SLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQG-------------------------FKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKL-VEETGLQLKQINN-WFINQRKRNWHNNSHSLTSLKSKRK 290          
The following BLAST results are available for this feature:
BLAST of EY679367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LET12_SOLLC1.236e-2546.71Homeobox protein knotted-1-like LET12 OS=Solanum l... [more]
KNAP3_MALDO2.182e-2243.71Homeobox protein knotted-1-like 3 OS=Malus domesti... [more]
KNAT4_ARATH1.415e-2144.91Homeobox protein knotted-1-like 4 OS=Arabidopsis t... [more]
KNAT3_ARATH2.043e-2040.43Homeobox protein knotted-1-like 3 OS=Arabidopsis t... [more]
KNOSD_ORYSJ4.550e-2042.51Homeobox protein knotted-1-like 13 OS=Oryza sativa... [more]
KNOS2_ORYSJ5.943e-2041.92Homeobox protein knotted-1-like 2 OS=Oryza sativa ... [more]
KNAT5_ARATH7.762e-2040.31Homeobox protein knotted-1-like 5 OS=Arabidopsis t... [more]
KNOSB_ORYSJ1.464e-1841.32Homeobox protein knotted-1-like 11 OS=Oryza sativa... [more]
KNOS3_ORYSJ8.312e-1437.58Homeobox protein knotted-1-like 3 OS=Oryza sativa ... [more]
KNAT7_ARATH4.561e-1234.95Homeobox protein knotted-1-like 7 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-D06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679367 ID=EY679367; Name=EY679367; organism=Citrus sinensis; type=EST; length=989bp
CATATATTGTTTAATACGGCAGTACGGTCGGGAATTCCGGGTCGACCCCG
CGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGGTGATTC
TTGTTTCCATCCAGTAATAGTATTACTCAACAACTGGCAAAACCTGCAAA
TATAGCTTATAGAAATTTTATGACCACCAGCTTTGGTTTGGCTACTTACA
GTAACCAATGGAATAATGAAGATCTTATTTCATCTATGTTTTCCCTTCTT
TCTCAAAATCGTTTTTATCACTTTCCAATCTCCTTGTATTAATGGCTCAA
CCTGAACTAAACCATGATGGATGAGCACTACAGGTGTATCTCCTGGTGAA
AGCACAGGTGCAACAATGTCCGATGATGATGAAGACCAGGTAGACAGTGA
CACAAACTTTTTTGATGGAAGTCTGGATGGACCCGATAGCATGGGATTTG
GTCCTCTTGTTCCAACTGAAAGTGAGAGGTCCTTGATGGAGCGTGTTAGG
CACGAACTGAAGCATGAGCTGAAACAGGTGAGAGTGCAAAACCATCTTCA
TTGGTAAACGACTCGAATGATTGTGCAGCTGATGTGTTTTCTGCTTTTAA
GGGTTACAAGGGAGAAGATTGTTGACATTAAGGAAAAAATTCTGCGTAAG
AGAAGGGCTGAAAATTGCCAGGTGACACCACCTCACTTTTAAATCCTTGG
GGGCTGTCCCAAGGCAAATGGGCCTTATCCCACTGAAGGAAAACAAGGGA
AGATGGGGGCAGGGAACCGGGCTTTGCAATAAAAGCCAAATAATCAATTG
GGTTTTAAAAACAAAAGGAAAAAGGAATTGGGCTTGGATACACCCTTCCT
CTTCCCACTGCCTTAAAAAAAAAAAACCCAAAAAGGAAGGCTGTCAATTG
GTACTTGGGTGTCCCCCTTACAAAAAAACCTAATTTTATTTTATTAAAAA
ATTTTTCCCCAAAGCTGATTTTTGGGAAAAAAAAATATA
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