EY679361

Overview
NameEY679361
Unique NameEY679361
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.829e-60
Identity = 114/145 (78.62%), Postives = 123/145 (84.83%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S  D    HD+ GFGPLLPTE+ERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTT+VLK WWQQH KWPYPT     KL E
Sbjct:  113 QHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVE 257          
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.119e-60
Identity = 114/145 (78.62%), Postives = 123/145 (84.83%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S  D    HD+ GFGPLLPTE+ERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTT+VLK WWQQH KWPYPT     KL E
Sbjct:  110 QHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVE 254          
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.602e-56
Identity = 110/144 (76.39%), Postives = 122/144 (84.72%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLH--MDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHAVEAVM CREIE +LQ LTG +L EGTGATMS+DED+    ++  +D   SD HDLMGFGPL+PT++ERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTT++LK WWQQHSKWPYPT     KL E
Sbjct:  136 QHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAPMLEGPMDMG-SDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVE 278          
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.828e-53
Identity = 103/143 (72.03%), Postives = 116/143 (81.12%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHA+EAVM C EIE +LQ+LTGVS GEGT ATMSDDEDD +  D +L     + HD MGFGPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPT     +L +
Sbjct:  248 QHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQ 390          
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.647e-51
Identity = 100/143 (69.93%), Postives = 114/143 (79.72%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHA+EAVM C E+E +LQ+LTGV+ GEGTGATMSDD+DD    D +      D  D MGFGPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPT     +L +
Sbjct:  245 QHVRVHAMEAVMACWELEQSLQSLTGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQ 387          
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 4.991e-50
Identity = 101/148 (68.24%), Postives = 116/148 (78.38%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHA+EAVM C EIE +LQ+ TGVS GEGTGATMS+DED+        Q  SD+H      D +GFGPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ HSKWPYPT     +L +
Sbjct:  207 QHVRVHAMEAVMACWEIEQSLQSFTGVSPGEGTGATMSEDEDE--------QVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQ 346          
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.991e-50
Identity = 101/148 (68.24%), Postives = 116/148 (78.38%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED+        Q  SD++      D++GFGPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPT     +L +
Sbjct:  243 QHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDE--------QVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQ 382          
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: KNOS2_ORYSJ (Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica GN=HOS58 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 7.969e-48
Identity = 94/142 (66.20%), Postives = 110/142 (77.46%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHA+EAVMGC E+E +LQ+LTG S GEGTGATMSDDED+     +     +D  D MGFGPL+ TE ERSL+ERVR ELK ELKQG+K ++ D+REEILRKRRAGKLPGDT S+LK WWQ HSKWPYPT     +L +
Sbjct:  124 QHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQ 265          
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 8.810e-47
Identity = 95/143 (66.43%), Postives = 110/143 (76.92%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHA+EAVM C E+E  LQ+LTG S GEGTGATMSD EDD    + ++   + D  D MGFG  LPTE+ERSLMERVRQELK ELKQG+K ++ D+REEILRKRRAGKLPGDTTS LK WWQ H+KWPYPT     +L +
Sbjct:  190 QHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQ 330          
BLAST of EY679361 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.963e-46
Identity = 93/142 (65.49%), Postives = 108/142 (76.06%), Query Frame = 1
Query:    1 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTVS*NLKLAE 426
            QHVRVHA+EAVM C E+E TLQ+LTG S  EG+GATMSDDED+     S     +D  D MGFGPL+ TE ERSL+ERVRQELK ELKQG++ ++ D+REEILRKRRAGKLPGDT S LK WWQ HSKWPYPT     +L +
Sbjct:  133 QHVRVHAMEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQ 274          
The following BLAST results are available for this feature:
BLAST of EY679361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
HD1_BRANA1.829e-6078.62Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2... [more]
KNAT7_ARATH3.119e-6078.62Homeobox protein knotted-1-like 7 OS=Arabidopsis t... [more]
KNOS3_ORYSJ1.602e-5676.39Homeobox protein knotted-1-like 3 OS=Oryza sativa ... [more]
KNAP3_MALDO2.828e-5372.03Homeobox protein knotted-1-like 3 OS=Malus domesti... [more]
LET12_SOLLC2.647e-5169.93Homeobox protein knotted-1-like LET12 OS=Solanum l... [more]
KNAT4_ARATH4.991e-5068.24Homeobox protein knotted-1-like 4 OS=Arabidopsis t... [more]
KNAT3_ARATH4.991e-5068.24Homeobox protein knotted-1-like 3 OS=Arabidopsis t... [more]
KNOS2_ORYSJ7.969e-4866.20Homeobox protein knotted-1-like 2 OS=Oryza sativa ... [more]
KNOSD_ORYSJ8.810e-4766.43Homeobox protein knotted-1-like 13 OS=Oryza sativa... [more]
KNOSB_ORYSJ1.963e-4665.49Homeobox protein knotted-1-like 11 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-C12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679361 ID=EY679361; Name=EY679361; organism=Citrus sinensis; type=EST; length=928bp
CAGCACGTCAGAGTCCATGCCGTTGAAGCTGTCATGGGCTGCCGTGAAAT
TGAGAATACTTTGCAAGCTCTCACCGGAGTATCATTGGGTGAAGGGACAG
GCGCAACAATGTCTGACGATGAGGATGACCTACATATGGATTTCTCTCTT
GATCAATCTGCTTCTGATAGTCATGATTTGATGGGTTTTGGTCCATTACT
TCCTACTGAAACTGAAAGGTCTCTTATGGAAAGAGTTAGACAGGAGTTGA
AGATTGAACTGAAGCAGGGTTTTAAATCAAGAATTGAAGATGTAAGAGAG
GAAATATTGAGAAAAAGAAGGGCCGGAAAATTGCCCGGTGACACAACTTC
AGTGCTCAAGACTTGGTGGCAGCAACACTCCAAATGGCCATACCCAACTG
TAAGTTAAAACTTAAAACTTGCTGAAAATCATGCAGCATCTCATATAATA
AAAGCTTTATAGTGTTTGACATTTTGGGTTAAAGCACTGCACCATCAGAA
ACTAAATTTCCTCGTGAGCTGGATTCAAACCACAGACCTCTTTAAACCAA
CTGGCACTCATAACCATATATACGAATTTATATAACTTCCATGAATATCC
TCAACTTAATGGAATAAATTATTGCCCAAATAAAACATGTGGCAATAAAT
GGTGTAACTTGGCAGGAAGAATGACAGGGCCAAAGCTAGTGGAAGGAGAC
AGGGTTTGCAACTTAAAGGCAATTCACCAACTGGGTTCCTCCAACCAAAA
GAAAGCCGAAATGGGGCACCCCACATTCCCGATCCTGGTGACGTCTTTTA
AAGTCCAACCCCGCAAAAAGGGAAAAAAAATTTCCCCCAAAAATATTTTT
GGGCAAATAATTTATATTGATTTTTTGAAACTATGAAGGGAATTAACCTT
CCTTTTTTTTGGGTCCACAAACAACATT
back to top