EY679360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.840e-79 Identity = 161/244 (65.98%), Postives = 178/244 (72.95%), Query Frame = 2 Query: 65 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGVIPPAGTYNYWADPYTLFVLEMGTHGDLPSTGRFQEWANPGFNGEGNTFPSEFEKNLGGSGQSGLTWRTL*FTLRGLGKKKSQWKE--FQPLGNGKMEKWNRLGFWGYVWYKVLVTGIG 790 E ARQI+G+R +QS T RK SFVVRAASTPPVKQGA+R LWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYGEVINGR+AMLGA GAIAPEILGKAGLIPQE ALAWFQTGVIPPAGTYNYWAD YTLFVLEM G RFQ+WA PG G + EK LGGSG L F G GK + KE + + NG++ LG+ + + LVTG+G Sbjct: 17 EAARQIIGSRISQSVT---RKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMG-FAEHRRFQDWAKPG--SMGKQYFLGLEKGLGGSGDPAYPGGPL-FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY----FIQALVTGVG 249
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 7.240e-75 Identity = 156/245 (63.67%), Postives = 171/245 (69.80%), Query Frame = 2 Query: 65 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGA-DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGVIPPAGTYNYWADPYTLFVLEMGTHGDLPSTGRFQEWANPGFNGEGNTFPSEFEKNLGGSGQSGLTWRTL*FTLRGLGKKKSQWKE--FQPLGNGKMEKWNRLGFWGYVWYKVLVTGIG 790 E RQ ARS S G SRKG +VRAA+TPPVKQG DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLGAVGAIAPE LGK GLIPQE ALAWFQTGVIPPAGTYNYWAD YTLFVLEM G RFQ+WA PG G + EK GGSG F G GK + KE + + NG++ LG+ + + LVTG+G Sbjct: 17 EAVRQSFRARSLPSSVGCSRKG--LVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMG-FAEHRRFQDWAKPG--SMGKQYFLGLEKGFGGSGNPAYPGGPF-FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY----FIQGLVTGVG 251
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.936e-19 Identity = 84/248 (33.87%), Postives = 114/248 (45.97%), Query Frame = 2 Query: 80 ILGARSAQSPTGSS-RKGSFVV----RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGVIPPAGTYNYWADPYTLFVLEMGTHGDLPSTGRFQEWANPGFNGEGNTFPSEFEKNLGGS--GQSGLTWRTL*FTLRGLGK-KKSQWKEF--QPLGNGKMEKWNRLGFWGYVWYKVLVTGIG 790 I+GA A G R F+ R+ + V DRPLWF +LDGSLPGD+GFDPLGL SDPE KW A E+++ R+AMLGA G PE L K G++ +W+ AG Y+ D TLFV+E+ G + WA+ G NT P L G+ G G W F G G ++ KE + + NG++ +G W++ + TG G Sbjct: 26 IVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTP---SWY------TAGEQEYFTDTTTLFVIELVLIG----WAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLW----FDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMG----AWFQHIYTGTG 246
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.610e-19 Identity = 76/222 (34.23%), Postives = 107/222 (48.20%), Query Frame = 2 Query: 143 RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGVIPPAGTYNYWADPYTLFVLEMGTHGDLPSTGRFQEWANPGFNGEGNTFPSEFEKNLGGS--GQSGLTWRTL*FTLRGLGK-KKSQWKEF--QPLGNGKMEKWNRLGFWGYVWYKVLVTGIG 790 R+A+T V DRPLWF +LDGSLPGD+GFDPLGL SDPE +W E+++ R+AMLGA G PE+L K G++ +W+ AG Y+ D TLF++E+ G + WA+ G NT P L G+ G G W F G G ++ KE + + NG++ +G W++ + TG G Sbjct: 52 RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTP---SWY------TAGEQEYFTDTTTLFIVELVLIG----WAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLW----FDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMG----AWFQHIYTGTG 246
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.299e-15 Identity = 68/202 (33.66%), Postives = 89/202 (44.06%), Query Frame = 2 Query: 146 AASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGVIPPAGTYNYWADPYTLFVLEMGTHGDLPSTGRFQEWANPGFNGEGNTFPSEFEKNLGGSGQSGLTWRTL*FTLRGLGKKKSQWKEFQPLGNGKMEKWNRLGF 748 +A T K A + W S YL GSL GD GFDPLGL+ DPE KW E++NGR+AMLG G + PE+ K G+I W+ AG Y+A TLFV+E R+Q+ NPG + F ++ G G G + L F K+K L NG++ LGF Sbjct: 42 SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII---NVPEWYD------AGKEQYFASSSTLFVIEFILF-HYVEIRRWQDIKNPGSVNQDPIF-KQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKE-------LANGRLAMLAFLGF 219
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15 Identity = 71/215 (33.02%), Postives = 93/215 (43.26%), Query Frame = 2 Query: 107 PTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGVIPPAGTYNYWADPYTLFVLEMGTHGDLPSTGRFQEWANPGFNGEGNTFPSEFEKNLGGSGQSGLTWRTL*FTLRGLGKKKSQWKEFQPLGNGKMEKWNRLGF 748 P G S SF V A K+G W S YL GSLPGD GFDPLGL+ DPE +W E++NGR+AMLG G + PE+ G+I W+ AG Y+A TLFV+E R+Q+ NPG + F ++ G G G + L F K+K + NG++ LGF Sbjct: 38 PVGCSPSASFKVEA------KKGE----WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENL------RWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPKWY------AAGKEEYFASSSTLFVIEF-ILSHYVEIRRWQDIKNPGSVNQDPIF-KQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKE-------IANGRLAMLAFLGF 218
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13 Identity = 51/135 (37.78%), Postives = 68/135 (50.37%), Query Frame = 2 Query: 191 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGVIPPAGTYNYWADPYTLFVLEMGTHGDLPSTGRFQEWANPGFNGEGNTFPS 592 W QS +YLDGSL GD GFDPL L+ DPE + +W +V+NGR+AMLG G + PE+L KAGL+ A W + G Y+A T + M + R+Q+ NPG + F S Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPE------DLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLM---NAPEWLRL-----PGKETYFASSSTALRVHMSS--TYVEIRRWQDIKNPGSVNQDPIFKS 154
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11 Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 173 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGV-IPPAGTYNYWADP 481 GADRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G I PE+L K G+ Q WF+ G I G +Y +P Sbjct: 50 GADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCIFPELLSKNGV--QFGEAVWFKAGAQIFSEGGLDYLGNP 148
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11 Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 65 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGV-IPPAGTYNYWADP 481 E +R++LG A+ + V ++A + + GADRP + S ++ SYL+G GDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PE+L K+G+ EA WF+ G I G +Y +P Sbjct: 23 ELSRKVLGNVEARVTMRRT-----VSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPET---FARNREL---EVIHARWAMLGALGCLTPELLAKSGVKFGEA--VWFKAGAQIFSEGGLDYLGNP 152
BLAST of EY679360 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.324e-11 Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 173 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQEAALAWFQTGV-IPPAGTYNYWADP 481 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ EA WF+ G I G +Y +P Sbjct: 49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNP 147 The following BLAST results are available for this feature:
BLAST of EY679360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679360 ID=EY679360; Name=EY679360; organism=Citrus sinensis; type=EST; length=892bpback to top |