EY679357

Overview
NameEY679357
Unique NameEY679357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length995
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB_NEUCR (Thioredoxin reductase OS=Neurospora crassa GN=cys-9 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.306e-38
Identity = 44/77 (57.14%), Postives = 62/77 (80.52%), Query Frame = 2
Query:    2 KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRLV 232
            +RL+LP E+++W  GISACA+CDGA P+F+ + L V+GGGD+A EEA+YLTK+  HV +LVR+++LRAS  M  RL+
Sbjct:  122 RRLHLPGEEKYWQNGISACAVCDGAVPIFRNKHLVVIGGGDSAAEEAMYLTKYGSHVTVLVRKDKLRASSIMAHRLL 198          

HSP 2 Score: 78.1814 bits (191), Expect = 8.306e-38
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLAA 585
            R+ N+  +TV FNT  V+V  + KG MS ++++ V TG+E  L+A GLFY IGH P + L++GQ+E D+ G V+   G     +  V+   D+ +     +    AG+GC+AA
Sbjct:  196 RLLNHEKVTVRFNTVGVEVKGDDKGLMSHLVVKDVTTGKEETLEANGLFYAIGHDPATALVKGQLETDADGYVVTKPGTTLTSVEGVFAAGDV-QDKRYRQAITSAGTGCMAA 307          
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB_PENCH (Thioredoxin reductase OS=Penicillium chrysogenum GN=TRR1 PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 1.915e-33
Identity = 43/77 (55.84%), Postives = 60/77 (77.92%), Query Frame = 2
Query:    2 KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRLV 232
            +RLNLP E+ +W  GISACA+CDGA P+F+ + L V+GGGD+A EEA++L K+   V +LVR+++LRAS  M DRL+
Sbjct:  127 RRLNLPGEETYWQNGISACAVCDGAVPIFRNKPLYVIGGGDSAAEEAMFLAKYGSSVTVLVRKDKLRASNIMADRLL 203          

HSP 2 Score: 66.6254 bits (161), Expect = 1.915e-33
Identity = 44/125 (35.20%), Postives = 65/125 (52.00%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTK--GQMSGILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLAAFVMGKIPWET 615
            R+  +P   V FNT   +V+   K  G M+ + ++ V +  E V++A GLFY +GH P S L++GQVELD  G +I   G     +  V+   D+ +     +    AGSGC+AA    K   ET
Sbjct:  201 RLLAHPKCKVRFNTVATEVIGENKPNGLMTHLRVKDVLSNAEEVVEANGLFYAVGHDPASGLVKGQVELDDEGYIITKPGTSFTNVEGVFACGDV-QDKRYRQAITSAGSGCVAALEAEKFIAET 324          
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB_PNECA (Thioredoxin reductase OS=Pneumocystis carinii GN=TRR1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.495e-33
Identity = 47/77 (61.04%), Postives = 66/77 (85.71%), Query Frame = 2
Query:    2 KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRLV 232
            +RLN+P E+ +W RGISACA+CDGA+P+F+G+ LAVVGGGD+A EE+++LT++A  V+LLVRR++LRAS  M  RL+
Sbjct:  122 RRLNIPGEEIYWQRGISACAVCDGAAPIFRGKPLAVVGGGDSAAEESLFLTRYATKVYLLVRRDKLRASPIMAKRLL 198          

HSP 2 Score: 57.7658 bits (138), Expect = 2.495e-33
Identity = 35/119 (29.41%), Postives = 62/119 (52.10%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLAAFVMGKI 603
            R+ ++P I + +NT  ++ + +    M+ + ++ V T E S L+  GLFY IGH P + L++GQVE D  G +I   G  +  +   +   D+ +     +    AGSGC+A     ++
Sbjct:  196 RLLHHPKIEILWNTVALESLGDNN-LMNCVKIKNVKTQEVSELQVNGLFYAIGHEPATTLVRGQVECDKDGYIITKNGGPETNIKGFFAAGDV-QDKKWRQAVTSAGSGCMAGLAAERL 312          
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB_DICDI (Thioredoxin reductase OS=Dictyostelium discoideum GN=trrA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.065e-32
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 2
Query:    2 KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRL 229
            KR+ +P E EFWS+G+SACA+CDGA P+++ + L VVGGGDTA EEA +LT FA  V LLVRR  +RAS+AMQ ++
Sbjct:  126 KRMGVPGETEFWSKGVSACAVCDGALPIYRNKHLVVVGGGDTAAEEATFLTHFASKVTLLVRRNVMRASKAMQQKV 201          

HSP 2 Score: 59.6918 bits (143), Expect = 2.065e-32
Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTKGQMS--GILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLAA 585
            +VF+NP I V ++T  V++    KG+ S   + +   +T   S L A+GLFY IGH+PNS  L GQ+  D +G +I   G  K  +  V+   D+ +     +    AG+GC+AA
Sbjct:  200 KVFSNPKIEVLWDTTLVEI----KGEKSVTSVGIYNSETKVSSNLDAQGLFYAIGHTPNSAFLNGQLNTDETGYIITQPGSTKTNVEGVFACGDV-QDKVYRQAITAAGNGCMAA 309          
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB_ASHGO (Thioredoxin reductase OS=Ashbya gossypii GN=TRR1 PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.065e-32
Identity = 45/76 (59.21%), Postives = 59/76 (77.63%), Query Frame = 2
Query:    2 KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRL 229
            KRL LP E+ +W RGISACA+CDGA P+F+ + LAVVGGGD+A EEA +LTK+   V +LVR++ +RAS  MQ R+
Sbjct:  124 KRLGLPGEETYWQRGISACAVCDGAVPIFRNKPLAVVGGGDSACEEASFLTKYGSKVFMLVRKDHMRASTIMQRRV 199          

HSP 2 Score: 62.3882 bits (150), Expect = 2.065e-32
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLAA 585
            RV  N  I V +NT  V+   +    +  + +R   TGEES L   GLFY IGH+P +QL+ GQV+LD SG V    G     +  ++   D+ + +   +    AGSGC+AA
Sbjct:  198 RVERNEKIEVLYNTAPVEAKGDGS-LLDALRVRDTRTGEESDLPVNGLFYAIGHTPATQLVAGQVDLDESGYVKTVPGSTLTNVPGLFAAGDV-QDSRYRQAVTSAGSGCMAA 308          
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB_YARLI (Thioredoxin reductase OS=Yarrowia lipolytica GN=TRR1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.941e-32
Identity = 45/76 (59.21%), Postives = 63/76 (82.89%), Query Frame = 2
Query:    2 KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRL 229
            KRL+LP ED++W +GISACA+CDGA P+F+ + LAVVGGGD+A EEA++LTK+   V+++VR+++LRAS  M  RL
Sbjct:  124 KRLSLPGEDQYWQQGISACAVCDGAVPIFRNKPLAVVGGGDSAAEEALFLTKYGSKVYVIVRKDKLRASAVMAKRL 199          

HSP 2 Score: 56.6102 bits (135), Expect = 5.941e-32
Identity = 34/119 (28.57%), Postives = 62/119 (52.10%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLAAFVMGKI 603
            R+ ++P + + FN  +++   + K  ++ + +    TGE+  L+  GLFY IGH P + +++GQVE D  G V+   G     +  V+   D+ +     +    AG+GC+AA    K+
Sbjct:  198 RLASHPKVEILFNHVSIEAKGDGK-LLNALEIENTLTGEKRDLEVNGLFYAIGHIPATSIVKGQVETDEEGYVVTVPGTANTSVKGVFAAGDV-QDKRYRQAITSAGTGCMAALDCEKL 314          
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB_PNEJI (Thioredoxin reductase OS=Pneumocystis jiroveci GN=TRR1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.007e-31
Identity = 45/77 (58.44%), Postives = 66/77 (85.71%), Query Frame = 2
Query:    2 KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRLV 232
            +RL++P E+ +W RGISACA+CDGA+P+F+G+ L+VVGGGD+A EE+++LT++A  V+LLVRR++LRAS  M  RL+
Sbjct:  122 RRLHIPGEETYWQRGISACAVCDGAAPIFRGKCLSVVGGGDSAAEESLFLTRYATKVYLLVRRDKLRASAVMAKRLL 198          

HSP 2 Score: 53.5286 bits (127), Expect = 1.007e-31
Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTKGQ---MSGILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLAAFVMGKI 603
            R+ N+P I V +NT    VV  + G    ++ + ++ V T   S L   GLFY IGH P + L++GQVE D +G +I   G  +  +   +   D+ +     +    AGSGC+A     ++
Sbjct:  196 RLLNHPKIEVIWNT----VVLRSLGDGHLLNRLEIKNVKTQVVSELHVSGLFYAIGHEPATALVRGQVECDDNGYIITKNGGPETNIKGFFAAGDV-QDKKWRQAVTSAGSGCMAGLAAERL 312          
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB2_ARATH (Thioredoxin reductase 2 OS=Arabidopsis thaliana GN=NTR2 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.218e-31
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 2
Query:    2 KRLNLPREDE----FWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDR 226
            KRL+     E    FW+RGISACA+CDGA+P+F+ + L V+GGGD+A EEA +LTK+   V+++ RR+  RAS+ MQ R
Sbjct:  175 KRLSFTGSGEGNGGFWNRGISACAVCDGAAPIFRNKPLVVIGGGDSAMEEANFLTKYGSKVYIIHRRDTFRASKIMQQR 253          

HSP 2 Score: 70.0922 bits (170), Expect = 2.218e-31
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTKGQ-MSGILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLAA 585
            R  +NP I V +N+  V+   +  G+ + G+ ++ V TG+ S LK  GLF+ IGH P ++ L GQ+ELD  G V+   G  K  ++ V+   D+ +     +    AG+GC+AA
Sbjct:  253 RALSNPKIEVIWNSAVVEAYGDENGRVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGQLELDEDGYVVTKPGTTKTSVVGVFAAGDV-QDKKYRQAITAAGTGCMAA 365          
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB_CHLPN (Thioredoxin reductase OS=Chlamydia pneumoniae GN=trxB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.226e-31
Identity = 44/77 (57.14%), Postives = 63/77 (81.82%), Query Frame = 2
Query:    2 KRLNLPR--EDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDR 226
            KRL +P    DEFW +G++ACA+CDGASP+FK + L V+GGGD+A EEA+YLT++  HV+++ RR++LRAS+AM+ R
Sbjct:  118 KRLEIPGAGNDEFWQKGVTACAVCDGASPIFKNKDLYVIGGGDSALEEALYLTRYGSHVYVVHRRDKLRASKAMEAR 194          

HSP 2 Score: 57.7658 bits (138), Expect = 2.226e-31
Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLAA 585
            R  NN  IT  +N+E V +  ++   +  + ++ V T E +  +A G+F+ IGH PN+  L GQ+ LD SG ++   G  K  +  V+   D+ +     +    AGSGC+AA
Sbjct:  194 RAQNNEKITFLWNSEIVKISGDSI--VRSVDIKNVQTQEITTREAAGVFFAIGHKPNTDFLGGQLTLDESGYIVTEKGTSKTSVPGVFAAGDV-QDKYYRQAVTSAGSGCIAA 303          
BLAST of EY679357 vs. ExPASy Swiss-Prot
Match: TRXB_CANGA (Thioredoxin reductase OS=Candida glabrata GN=TRR1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.331e-31
Identity = 43/75 (57.33%), Postives = 60/75 (80.00%), Query Frame = 2
Query:    2 KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDR 226
            KRL++P E+ +W +GISACA+CDGA P+F+ + LAV+GGGD+A EEA +LTK+   V+L+VR++ LRAS  MQ R
Sbjct:  124 KRLHIPGEETYWQQGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVYLIVRKDHLRASTIMQRR 198          

HSP 2 Score: 58.151 bits (139), Expect = 8.331e-31
Identity = 35/112 (31.25%), Postives = 61/112 (54.46%), Query Frame = 1
Query:  247 RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLKAKGLFYGIGHSPNSQLLQGQVELDSSGNVIC*GGYCKNFLLKVYLQLDMCRTTNGNKQ*LPAGSGCLA 582
            R   N  I + +NT T++   + K  ++ + ++ V T EE+ L   GLFY IGH+P +++++GQVE D +G +    G     +  V+   D+ + +   +    AGSGC+A
Sbjct:  198 RAEQNDKIEILYNTVTLEAQGDGK-LLNNLRIKNVKTNEETDLPVNGLFYAIGHTPATKIVEGQVETDETGYIKTIPGSSLTSVPGVFAAGDV-QDSKYRQAITSAGSGCMA 307          
The following BLAST results are available for this feature:
BLAST of EY679357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
TRXB_NEUCR8.306e-3857.14Thioredoxin reductase OS=Neurospora crassa GN=cys-... [more]
TRXB_PENCH1.915e-3355.84Thioredoxin reductase OS=Penicillium chrysogenum G... [more]
TRXB_PNECA2.495e-3361.04Thioredoxin reductase OS=Pneumocystis carinii GN=T... [more]
TRXB_DICDI2.065e-3260.53Thioredoxin reductase OS=Dictyostelium discoideum ... [more]
TRXB_ASHGO2.065e-3259.21Thioredoxin reductase OS=Ashbya gossypii GN=TRR1 P... [more]
TRXB_YARLI5.941e-3259.21Thioredoxin reductase OS=Yarrowia lipolytica GN=TR... [more]
TRXB_PNEJI1.007e-3158.44Thioredoxin reductase OS=Pneumocystis jiroveci GN=... [more]
TRXB2_ARATH2.218e-3151.90Thioredoxin reductase 2 OS=Arabidopsis thaliana GN... [more]
TRXB_CHLPN2.226e-3157.14Thioredoxin reductase OS=Chlamydia pneumoniae GN=t... [more]
TRXB_CANGA8.331e-3157.33Thioredoxin reductase OS=Candida glabrata GN=TRR1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-C08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679357 ID=EY679357; Name=EY679357; organism=Citrus sinensis; type=EST; length=995bp
CAAAAGGCTCAATTTACCTCGTGAAGATGAGTTTTGGAGTAGAGGAATCA
GTGCTTGTGCAATATGTGATGGAGCATCTCCCCTGTTTAAAGGGCAAGTT
CTTGCCGTGGTTGGAGGAGGTGATACAGCTACAGAGGAAGCAATATACTT
AACGAAATTTGCTCGTCATGTTCATTTACTTGTTCGTAGGGAACAGCTAA
GGGCATCCAGAGCAATGCAAGATAGGTTGGTTATCGCGAATGTTTCAGAG
TGTTCAACAACCCAAATATCACTGTGCACTTCAATACGGAGACAGTTGAT
GTTGTCAGCAATACAAAAGGCCAAATGTCCGGCATTTTACTTAGAAAAGT
TGACACTGGTGAGGAATCTGTGCTAAAGGCAAAAGGCTTATTTTATGGTA
TAGGTCATTCACCGAATAGCCAGTTGCTGCAAGGCCAAGTTGAACTTGAC
AGCTCAGGTAATGTGATTTGTTGAGGAGGGTACTGCAAAAACTTTCTGTT
GAAGGTGTATTTGCAGCTGGATATGTGCAGGACCACGAATGGAAACAAGC
AGTAACTGCCTGCTGGATCAGGATGCCTTGCTGCTTTTGTCATGGGAAAA
ATACCTTGGGAAACATTACTCTCCTTATTGAGTTTTGCTCAGCCCTCTAA
CCTTGAATATCCTCACATGGATCTTACTGATTAAAAATGTTCTAATAATG
GGTTCGAAACCTTTTGACATCAAGGATATGGGACAAATTATGGACCCTAA
AAGATAGTAAACCAAGAAGGTTCTAAGGCTTAATAAGGTTACAAATAAAA
TTTTAGCAAATTTGGCGGGTACACATCCACAGAATATTTAAAAGCCCAAG
AACATGGGCAAGCGGAAGACCACAGGTTATTTGTGAAAAGTAAACATGGT
ACATAATTATTAGAATATGAGTACAAAAATGTATTAAAAGAATATATCAA
TGACCGATTAACAGATAATGTACTAAACATATTTCCAATATTATG
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