EY679355

Overview
NameEY679355
Unique NameEY679355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679355 vs. ExPASy Swiss-Prot
Match: Y5519_ARATH (Uncharacterized protein At5g05190 OS=Arabidopsis thaliana GN=Y-1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.244e-22
Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 1 
Query:   46 LKEKHFVAKRHLRPTAGGAPFITCYSCLYPLQLPADFLVFKRRFHLLRCGACSKVLKFSLKRRTHIVP 249
            L+E+  VAKRH+RPTAGGAPF++CYSC   LQLP DFL+FKR+ HLLRCG C+ VL+FSL+ R H+VP
Sbjct:  479 LRERQRVAKRHVRPTAGGAPFVSCYSCSENLQLPVDFLIFKRKHHLLRCGTCTTVLRFSLQSRNHLVP 546
The following BLAST results are available for this feature:
BLAST of EY679355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5519_ARATH2.244e-2267.65Uncharacterized protein At5g05190 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-C06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679355 ID=EY679355; Name=EY679355; organism=Citrus sinensis; type=EST; length=1007bp
CACTGTGAAACCAAGTCTGATTATCAAAGGCATGAAGATCATTGTTTGAA
GGAGAAACATTTCGTGGCAAAGAGACATCTCCGTCCCACAGCTGGAGGCG
CCCCTTTCATAACTTGTTACAGTTGCTTGTATCCACTGCAGCTCCCAGCA
GATTTTCTTGTCTTCAAAAGGAGGTTCCATCTGCTAAGGTGTGGTGCTTG
TTCTAAGGTTCTTAAGTTCTCACTTAAAAGAAGAACTCACATAGTTCCAT
ATACACCAGAGGCTGCAACCCCTTCACCTAGTCAGCTTGTTGACTACAAT
GATGCTATTAATAGAAAAAATTCAGTTTCTTCTTCTCGTGGCAACAGTTG
TTCGCCTGCTGACCCTGTCACCTGCTCAGATGATTATGGACTATCACATT
GTAAAAGTTGCTCTACTGAAGGAGATTCTGTTATCATTTGTAACATTTCC
TCATGGTCAAAAGAATCACAAGAGGTACAAATTTTTTCTAAGAATTCTTT
CTGAGTCAACGAAAGATAAGCCTCAAATTTGGTAAAAAAACATCTCAGAA
AACAAAATATAACAAACCTAGGGAAACAACATTCATTCACCATAACTTTT
CCTATTATTAATATCATATCCAGTATAAAATTTTATTTATTAATTTTAAG
TAAATTTCACAGTCAAAAGGCTTTCCCCCCTTCTCGCATTTGTAAGTTAA
ACTTCTATTCTCAAGTCACAGTTCTGAAGAGGGCTACCGATCACATTAAA
ATTGAAGGGAAACATTTAATCATTTCATAATTAAATAAAATCTTATGGAA
TTTTAATATTAAAATATAAAGATTCTCAAGCAAAAGTTTCAATATGAAGA
AAATCTCGACTTATATCAAGATTAGTAAAGAAATATCGTTTGACATCCCT
TCTTTTATATCTACACATCTTCACCAAAATTTAATTTATATCAATGACTT
ACATTTTCTTTACTTATCAAGCTTTCGCAATATTACATTTTTGACATTTT
TCTAGGA
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