EY679351

Overview
NameEY679351
Unique NameEY679351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length986
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679351 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.150e-39
Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 1 
Query:  160 EFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLGS 378
            E  K  +GL+KVVLR +R   AE+YLYGG VTSWKND+GEELLF+SSKA FKPPKAIRGGIPIC PQF + G+
Sbjct:   25 ELVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGIPICLPQFGTHGN 97

HSP 2 Score: 57.3806 bits (137), Expect = 3.150e-39
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 2 
Query:  380 LESHGFAKNRFWSIDTDPPAFPTNSSSKAYIDLITK 487
            LE HGFA+NRFWSID DPP  P N + KA++DLI +
Sbjct:   98 LEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILR 133

HSP 3 Score: 36.5798 bits (83), Expect = 3.150e-39
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 3 
Query:  483 LRPSEKDLKNWAHSFEFRL 539
            LRP+E+DLK W HSFEFRL
Sbjct:  132 LRPAEEDLKIWPHSFEFRL 150
The following BLAST results are available for this feature:
BLAST of EY679351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AAPC_CENCI3.150e-3971.23Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-C02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679351 ID=EY679351; Name=EY679351; organism=Citrus sinensis; type=EST; length=986bp
CTCTCGCTCTACTGAAGTGAGCTAACACTAAGTGAGAGAGATTTCATTTT
CATATCAAATGCTGTGAATTTTCACATTAAACGAAGAGTAGAAAATCTTG
GCGGCGGCGGTGGCGGCAGCGGCTTCAAAATCATGTCGACGGAGAAGTTT
CTTCCAGTTGAGTTCTGCAAGGGCAATAACGGCCTCGACAAGGTCGTTCT
CCGCGAGTCACGCGGCAGCTCCGCTGAGGTGTATTTGTACGGGGGTCATG
TGACGTCTTGGAAGAATGATCATGGAGAGGAATTGCTTTTTGTCAGTAGT
AAGGCTACATTCAAGCCTCCCAAAGCGATTCGCGGAGGAATTCCAATCTG
CTTTCCTCAGTTTGCAAGTCTTGGCTCCTCTGGAGTCGCATGGGTTTGCT
AAAAATCGGTTTTGGAGTATTGACACTGACCCGCCTGCTTTTCCAACTAA
TTCCTCAAGTAAGGCTTATATTGATTTGATAACTAAGGCCCTCGGAAAAA
GATCTGAAGAATTGGGCACACAGTTTTGAGTTCCGTCTCATGGAAACTTT
TGATTCCCTGGTGGTGATCTAGATGTTGAATCTCCCACGTAGGAAATAAC
ATCCTCTGAATGGGAAAGTCTATTTTTTCGTTCTACATTTTGTGAATATA
CCACCTAATTCTTCTGTTTTCTAAAAATCCAGTGGAGAGTTCCAGTATGA
GGGATTTGGAAAACACCGGGGATAAACCCCCGACACCTTTGATAAACATA
AAGGAGCGTGTATTTAGTGAATAAAAAGGGGAAAGGCCTAACAAAAATGA
GAAATCCATAAAAGAGGGAGAATGTAGGAAAATCCGCAGAATAATCCCGC
ATCACAAACTATTTGCGCGTTTTCTCGCGATTCACTGAAACAAACTTAGG
ACAAATAAACTCTTTGATTGCCCCAATGTGCATGATAAATTAAAGAAGGG
GCGTTGTTCCCGATAACGAGAGGGGCTGGGAGCAGT
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