EY679338

Overview
NameEY679338
Unique NameEY679338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679338 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.265e-21
Identity = 49/101 (48.51%), Postives = 60/101 (59.41%), Query Frame = 1
Query:  313 AVMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVN*FWKHSI*ASRTQLILS-----PPRDLTGLPEGYSLDLGWELSMV 600
            A MHDLRLIHTDLKPENIL VS EY+KIPDYK  +R   D +Y+K LPKSSAIK+  F   +        I+S      P  + G+   Y  DL W +  +
Sbjct:  229 AYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGWNYPCDL-WSIGCI 328          

HSP 2 Score: 40.0466 bits (92), Expect = 1.265e-21
Identity = 25/62 (40.32%), Postives = 36/62 (58.06%), Query Frame = 3
Query:  600 DMWSVGCILVWTRCPGRSLCFKNMKTWEHLGHEGKGVLGPIPPPRVKKKSNKPG*EFLFKKG 785
            D+WS+GCILV   C G +L F+  +  EHL    + VLGP+PP  V +   +   E  F++G
Sbjct:  321 DLWSIGCILV-ELCSGEAL-FQTHENLEHLAMMER-VLGPLPPHMVLRADRRS--EKYFRRG 377          
BLAST of EY679338 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.748e-17
Identity = 48/101 (47.52%), Postives = 60/101 (59.41%), Query Frame = 1
Query:  313 AVMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVN*FWKHSI*ASRTQLILS-----PPRDLTGLPEGYSLDLGWELSMV 600
            A MHDLR+IHTDLKPENIL VS +Y+KIP+YK  +R   DV  YKR+PKSSAIKV  F   +        I+S      P  + GL   Y  D+ W +  +
Sbjct:  212 AFMHDLRMIHTDLKPENILLVSSDYVKIPEYK-GSRLQRDV-CYKRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLGWSYPCDV-WSVGCI 309          

HSP 2 Score: 36.965 bits (84), Expect = 2.748e-17
Identity = 22/48 (45.83%), Postives = 29/48 (60.42%), Query Frame = 3
Query:  600 DMWSVGCILVWTRCPGRSLCFKNMKTWEHLGHEGKGVLGPIPPPRVKK 743
            D+WSVGCI+V   C G +L F+  +  EHL    + VLGP P   +KK
Sbjct:  302 DVWSVGCIIV-ELCTGEAL-FQTHENLEHLAMMER-VLGPFPQQMLKK 346          
BLAST of EY679338 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 6.771e-15
Identity = 44/104 (42.31%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  313 AVMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVN*FWK--------HSI*ASRTQLILSPPRDLTGLPEGYSLDLGWELSMV 600
            A MH+L+L+HTDLKPENIL VS E +K+PD K   RS  +  +++ LPKSSAIK+  F          HSI  +R       P  + GL   Y  DL W +  +
Sbjct:  185 AYMHELQLVHTDLKPENILLVSSENVKLPDNK---RSAANETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRH---YRSPEVILGLGWSYQCDL-WSIGCI 281          

HSP 2 Score: 36.5798 bits (83), Expect = 6.771e-15
Identity = 24/62 (38.71%), Postives = 34/62 (54.84%), Query Frame = 3
Query:  600 DMWSVGCILVWTRCPGRSLCFKNMKTWEHLGHEGKGVLGPIPPPRVKKKSNKPG*EFLFKKG 785
            D+WS+GCIL +  C G +L F+     EHL    +  LGP+P    +K S   G E  F++G
Sbjct:  274 DLWSIGCIL-FELCTGEAL-FQTHDNLEHLAMMER-ALGPLPEHMTRKASR--GAEKYFRRG 330          
The following BLAST results are available for this feature:
BLAST of EY679338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AFC1_ARATH1.265e-2148.51Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
AFC2_ARATH2.748e-1747.52Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
AFC3_ARATH6.771e-1542.31Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-B01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679338 ID=EY679338; Name=EY679338; organism=Citrus sinensis; type=EST; length=949bp
CCCATTTCCGGTTGATCTTGTCCCTGATATTGGCAGACAACTGTTGGAAT
GTGTAGCATGTGTGTAATCTGCTATTACTCTTCTTTTTTCCCCGTAGTTG
GTAACCATTTTTCGGGAGTTATCTGAGCCAATTCATGCTCGCACAAAGGC
ACTAGTAGCTTTTCTGTTAAGTTTAATAAATTTTTATTTCTTTTTTGTAT
TTTTATTTTCGTGGGAGCTTTGATTTGTCTCTCAAGTGAATTGCTGAGAT
TTGAGGCTGGATTATAATAGTCATGCCATAAGTGCTTATATGCACACACT
CATTTTCATTGTGCAGTCATGCATGATTTGCGCCTCATCCATACCGACTT
GAAGCCTGAGAATATACTTTTTGTTTCTCCGGAATACTTGAAAATACCTG
ATTACAAGGTTACGGCCCGATCACCAACTGATGTGAACTATTACAAGAGG
TTGCCAAAGTCAAGTGCTATTAAGGTTAATTGATTTTGGAAGCACAGCAT
ATGAGCATCAAGAACACAACTAATATTGTCTCCACCAAGGGACCTAACCG
GGCTTCCTGAAGGTTATTCTTTGGACCTTGGATGGGAGTTATCCATGGTG
ACATGTGGAGTGTTGGATGTATTTTGGTTTGGACCCGGTGCCCCGGGAGA
AGCCTTTGTTTCAAAAACATGAAAACTTGGGAACACTTGGGCCATGAAGG
GAAAGGGGTTCTTGGCCCGATACCTCCACCCAGGGTAAAAAAGAAGTCCA
ACAAACCGGGCTGAGAATTTTTGTTTAAAAAAGGTGAAATTGGGACTGGG
CACAGGGGGGGGTCAACTTCCACGGGGGAAAGCTATTAAAGATTGGTTTC
TAAAACTCTAACTTCTATCCCACAGAAACCTAATTGAATGGGGAAAGAGG
GAAGAATCACCTGAACTGTGGAAGACCTTACAAGGAATATTTGTGGGGA
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