EY679336

Overview
NameEY679336
Unique NameEY679336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22
Identity = 50/64 (78.12%), Postives = 54/64 (84.38%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVAD-----TRNLILESS 198
            +GSPHPRGYYKCSSVRGCPARKHVERA DD SML+VTYEG+HNHSLS AD       +LILESS
Sbjct:  254 KGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNHSLSAADLAGAAVADLILESS 317          
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRKY1_MAIZE (Protein WRKY1 OS=Zea mays PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVA 168
            +GSPHPRGYYKCSSVRGCPARKHVER +DDPSML+VTYEG+HNH+  +A
Sbjct:  346 KGSPHPRGYYKCSSVRGCPARKHVERCVDDPSMLIVTYEGDHNHNRVLA 394          
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRKY7_ARATH (Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVADT 174
            +GSPHPRGYYKCSSVRGCPARKHVERALDD  ML+VTYEG+HNH+L +  T
Sbjct:  295 KGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNHALVLETT 345          
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRK39_ARATH (Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHS 156
            +GSPHPRGYYKCSSVRGCPARKHVER +D+ SML+VTYEGEHNHS
Sbjct:  276 KGSPHPRGYYKCSSVRGCPARKHVERCIDETSMLIVTYEGEHNHS 320          
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLS 162
            +GSPHPRGYYKCS+ RGCPARKHVERALDDP+ML+VTYEGEH H+ S
Sbjct:  260 KGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRHNQS 306          
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.802e-18
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHS 156
            +GSPHPRGYYKCSSVRGCPARKHVER +++ SML+VTYEGEHNHS
Sbjct:  276 KGSPHPRGYYKCSSVRGCPARKHVERCVEETSMLIVTYEGEHNHS 320          
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRK17_ARATH (Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 38/47 (80.85%), Postives = 42/47 (89.36%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLS 162
            +GSPHPRGYYKCS+ RGCPARKHVERALDD +ML+VTYEGEH H  S
Sbjct:  257 KGSPHPRGYYKCSTFRGCPARKHVERALDDSTMLIVTYEGEHRHHQS 303          
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNH 153
            +GSP+PRGYYKCSS+RGCPARKHVER L+DP+ML+VTYE EHNH
Sbjct:  327 KGSPYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNH 370          
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14
Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSV-ADTRN 180
            +GSP+PRGYY+CSS +GCPARK VER+ DDP+M+++TY  EHNH   + + TRN
Sbjct:   88 KGSPYPRGYYRCSSTKGCPARKQVERSRDDPTMILITYTSEHNHPWPLTSSTRN 141          
BLAST of EY679336 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.252e-12
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 1
Query:   22 QGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNH 153
            +GSP+PRGYY+CSS +GC ARK VER+  DP+MLV+TY  EHNH
Sbjct:  229 KGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNH 272          
The following BLAST results are available for this feature:
BLAST of EY679336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
WRK15_ARATH6.623e-2278.13Probable WRKY transcription factor 15 OS=Arabidops... [more]
WRKY1_MAIZE3.076e-1981.63Protein WRKY1 OS=Zea mays PE=1 SV=1[more]
WRKY7_ARATH4.018e-1980.39Probable WRKY transcription factor 7 OS=Arabidopsi... [more]
WRK39_ARATH1.527e-1886.67Probable WRKY transcription factor 39 OS=Arabidops... [more]
WRK11_ARATH1.527e-1882.98Probable WRKY transcription factor 11 OS=Arabidops... [more]
WRK74_ARATH5.802e-1884.44Probable WRKY transcription factor 74 OS=Arabidops... [more]
WRK17_ARATH2.205e-1780.85Probable WRKY transcription factor 17 OS=Arabidops... [more]
WRK21_ARATH3.761e-1781.82Probable WRKY transcription factor 21 OS=Arabidops... [more]
WRK65_ARATH2.980e-1461.11Probable WRKY transcription factor 65 OS=Arabidops... [more]
WRK35_ARATH1.252e-1268.18Probable WRKY transcription factor 35 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-A11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679336 ID=EY679336; Name=EY679336; organism=Citrus sinensis; type=EST; length=727bp
ACCCCGCGTCCGGAAACCCATCAAGGATCTCCTCATCCGAGGGGTTACTA
CAAGTGCAGCAGTGTGAGAGGCTGCCCTGCACGCAAGCACGTGGAGAGAG
CGTTGGATGATCCATCGATGCTTGTAGTCACCTACGAAGGCGAGCACAAT
CACTCACTCTCTGTTGCAGATACTAGAAATCTCATCCTGGAATCTTCTTA
GACACGCAACAAAAAAACCAGTCGTGAGAAATTAGATCATTGGTTAGGGG
GGGAATTACATAGCGGTGGTGGCAATATTATATATTATATTTAACAGAAC
TAGGGAACTGTCTGGCTGGCTAGCTTTTGCTTTAAAGTTAAGAATTCAGC
AGAAGCCCAGCTTGGAATTGTCTGTCTCGAAGGAGATTTCTGGGTTCATT
TTGTTCATTCCCCTGTCTGTATAATATGGGATTCCTCTTGGTATAGCTCT
ACCTGTCTCTATACCCAAGCACTGTGTGTTCCAATGTTAAATTAGAAACT
AAAAGCTAGGGAAGATGTTGGATTTGGTTCTTTATGTTTCCCCAGGATTT
GAAATCTTAAAGCTAAGTAATTGAGGTGGCTGCGCTTTTTTATTTCTCAA
AATAAATATAAAAAATAAATAAAATAAAAGAATATGAATATATAAAAAAA
TGGGGGGGCCGCTCTTAAGGAACCAGGTTTACTTACCCGGGGGATGGCAA
ATCCATACCCTTTCAATAATGGCCCCT
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