EY744653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCS_ARATH (Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=2 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.999e-58 Identity = 121/183 (66.12%), Postives = 138/183 (75.41%), Query Frame = 1 Query: 208 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNGLLRRNCCII*LGELG*KVVPGKGAMGSLWGPNGAVYAKGPQDPLGGAPAGGHVKKGLEPPVAFEKKI 756 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+C+AFC+E+EDVISMS AVT+L EKYKIDP QIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTN ++ + G G + + AVYA+GP P GGA A + G + P+ FE K+ Sbjct: 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWV-ESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIA-MLIGPDAPIVFESKL 181
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.506e-36 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 214 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN 552 K+VGILA+++YFP V Q LE + GKYT+GLGQ M FCS ED+ S+ LT V L+E+ K+ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TN Sbjct: 52 KDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTN 164 HSP 2 Score: 44.2838 bits (103), Expect = 1.506e-36 Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = 2 Query: 554 ACYGGTAALFNWVNWGEK*FL-GRALWGPCGDRTGRFMQKDRKTPWEEPLLVVMLKRAWSPPLLLKRKFKGGIYVPRAFNFLKPK-----PLVGGK 823 ACYGGTA+LFN NW E + GR CGD R T + +++ +A PL+L++ + G ++ A++F KP PLV GK Sbjct: 165 ACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNPRPTGGAGAVAMLIGPKA---PLVLEQGLR-GTHMENAYDFYKPNLASEYPLVDGK 256
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCS2_MOUSE (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus GN=Hmgcs2 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 1.962e-36 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 214 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN 552 K+VGILA+++YFP V Q LE + GKYT+GLGQ M FCS ED+ S+ LT V L+E+ K+ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TN Sbjct: 52 KDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTN 164 HSP 2 Score: 43.8986 bits (102), Expect = 1.962e-36 Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = 2 Query: 554 ACYGGTAALFNWVNWGEK*FL-GRALWGPCGDRTGRFMQKDRKTPWEEPLLVVMLKRAWSPPLLLKRKFKGGIYVPRAFNFLKPK-----PLVGGK 823 ACYGGTA+LFN NW E + GR CGD R T + +++ +A PL+L++ + G ++ A++F KP PLV GK Sbjct: 165 ACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPKA---PLVLEQGLR-GTHMENAYDFYKPNLASEYPLVDGK 256
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCSA_DICDI (Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum GN=hgsA PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36 Identity = 86/184 (46.74%), Postives = 115/184 (62.50%), Query Frame = 1 Query: 214 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNGLLRRNCCI-I*LGELG*KVVPGKGAMGSLWGPNGAVYAKGPQDPLGGAPAGGHVKKGLEPPVAFEKKI*G 762 +N+GI +++YFP T V QE LE DG S+GKYT+GLGQ MAFC + ED+ S+SL AV NL++K+ +DP IGRLEVG+ETVIDKSKS+KT LM +F K GNT I+G+D+ N + L + G+ A+ + + AVY KGP P GGA + G P+ FE + G Sbjct: 5 ENIGIHGIEVYFPSTYVAQEDLEKFDGVSQGKYTLGLGQTNMAFCGDREDIYSLSLNAVNNLMDKFNVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGTSALHNALQWMESSYWDGRNAI--VVAGDIAVYEKGPARPTGGAGVVA-MLIGPNAPITFESGLRG 185
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCS1_CHICK (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus GN=HMGCS1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.991e-34 Identity = 84/187 (44.92%), Postives = 116/187 (62.03%), Query Frame = 1 Query: 214 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNGLLRRNCCII-*LGELG*KVVPGKGAMGSLWGPNGAVYAKGPQDPLGGAPAGGHVKKGLEPPVAFEKKI*GGNL 771 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FCS+ ED+ S+ LT V L+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TN + + + G+ A+ + + AVYA G P GGA A + G P+ FE+ + G ++ Sbjct: 15 KDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYAL--VVAGDIAVYATGNARPTGGAGAVA-MLVGSNAPLIFERGLRGTHM 198
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCS1_PONAB (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.959e-33 Identity = 83/187 (44.39%), Postives = 117/187 (62.57%), Query Frame = 1 Query: 214 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNGLLRRNCCII-*LGELG*KVVPGKGAMGSLWGPNGAVYAKGPQDPLGGAPAGGHVKKGLEPPVAFEKKI*GGNL 771 K+VGI+A++IYFP V Q LE +DG + GKYTIGLGQ M FC++ ED+ S+ +T V NL+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TN + + + G+ A+ + + AVYA G P GG A + G P+ FE+ + G ++ Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVAAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYAL--VVAGDIAVYATGNARPTGGVGAVA-LLIGPNAPLIFERGLRGTHM 198
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCS1_HUMAN (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 6.476e-33 Identity = 83/187 (44.39%), Postives = 116/187 (62.03%), Query Frame = 1 Query: 214 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNGLLRRNCCII-*LGELG*KVVPGKGAMGSLWGPNGAVYAKGPQDPLGGAPAGGHVKKGLEPPVAFEKKI*GGNL 771 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ +T V NL+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TN + + + G+ A+ + + AVYA G P GG A + G P+ FE+ + G ++ Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYAL--VVAGDIAVYATGNARPTGGVGAVA-LLIGPNAPLIFERGLRGTHM 198
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCS2_BLAGE (Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica GN=HMGCS-2 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.488e-32 Identity = 60/117 (51.28%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 214 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNGLLR 564 ++VGI+ +++ FP V Q LE +D S GKYT+GLGQ+ M C++ ED+ S+ LTAV L+E+ ID IG LEVG+ET++DK KS+KT LMQ+FE+ GNTD+EG+D+ N R Sbjct: 6 EDVGIIGIEMIFPSLYVDQAELETYDEVSPGKYTMGLGQDKMGVCTDREDINSLCLTAVDKLMERNNIDYNDIGWLEVGTETILDKVKSVKTVLMQLFEESGNTDVEGIDTINACYR 122 HSP 2 Score: 27.7202 bits (60), Expect = 2.488e-32 Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 554 ACYGGTAALFNWVNWGE 604 ACY GTAALFN + W E Sbjct: 119 ACYRGTAALFNALIWIE 135 HSP 3 Score: 27.335 bits (59), Expect = 2.488e-32 Identity = 9/19 (47.37%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 594 IGVKSSSWEGRYGVLVGTE 650 I ++SSSW+GRY ++V + Sbjct: 132 IWIESSSWDGRYAIVVAAD 150
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCS1_CRIGR (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Cricetulus griseus GN=HMGCS1 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.214e-32 Identity = 81/187 (43.32%), Postives = 116/187 (62.03%), Query Frame = 1 Query: 214 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNGLLRRNCCII-*LGELG*KVVPGKGAMGSLWGPNGAVYAKGPQDPLGGAPAGGHVKKGLEPPVAFEKKI*GGNL 771 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V NL+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TN + + + G+ A+ + + A+YA G P GG A + G P+ F++ + G ++ Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQNLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYAL--VVAGDIAIYATGNARPTGGVGAVA-LLIGPNAPLIFDRGLRGTHM 198
BLAST of EY744653 vs. ExPASy Swiss-Prot
Match: HMCS1_RAT (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus norvegicus GN=Hmgcs1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.483e-32 Identity = 81/187 (43.32%), Postives = 115/187 (61.50%), Query Frame = 1 Query: 214 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNGLLRRNCCII-*LGELG*KVVPGKGAMGSLWGPNGAVYAKGPQDPLGGAPAGGHVKKGLEPPVAFEKKI*GGNL 771 K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V L+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TN + + + G+ A+ + + A+YA G P GG A + G PV F++ + G ++ Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYAL--VVAGDIAIYASGNARPTGGVGAVA-LLIGPNAPVIFDRGLRGTHM 198 The following BLAST results are available for this feature:
BLAST of EY744653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744653 ID=EY744653; Name=EY744653; organism=Citrus sinensis; type=EST; length=863bpback to top |