EY679333

Overview
NameEY679333
Unique NameEY679333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length965
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: YI01_SCHPO (Putative amidase C869.01 OS=Schizosaccharomyces pombe GN=SPAC869.01 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.604e-30
Identity = 83/197 (42.13%), Postives = 117/197 (59.39%), Query Frame = 3
Query:  123 SNAIHAFP--------IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSKL*ILQSTQWFQW*GGGPGKESIMFYQQILCGSSSWLSNFRNCKTWAAGALG 686
            +N+ + FP        + +ATI  LQ   +   LTS  +V  YL    ++NP ++G++++NPD L+ A + D ER   A G +RG LHGIP ++KDN ATKDKM+TTAGSYALLGS+VPRDA VV +LR+AGA++ G A+LSEW+    ++S  + +      G+    F   +  G SS  S         A ALG
Sbjct:   50 TNSTNIFPMPKCQNITLEDATIDQLQNYMENGILTSTDIVHCYLDRYLQVNPYVNGILQLNPDVLTIASELDDER---ANGIIRGPLHGIPFIVKDNFATKDKMDTTAGSYALLGSIVPRDAYVVKQLREAGAVLFGHATLSEWAD---MRSNDYSEGYSARGGQSRCPFNLTVNPGGSSSGSAISVASNMIAFALG 240          
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: GATA_ACIBS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain SDF) GN=gatA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.782e-13
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  147 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWS 530
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++
Sbjct:    4 LHRLSIRELAKGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALCEADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFA 128          
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: GATA_ACIBY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AYE) GN=gatA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.327e-13
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  147 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWS 530
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++
Sbjct:    4 LHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFA 128          
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: GATA_ACIBC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain ACICU) GN=gatA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.327e-13
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  147 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWS 530
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++
Sbjct:    4 LHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFA 128          
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: GATA_ACIB5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AB0057) GN=gatA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.327e-13
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  147 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWS 530
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++
Sbjct:    4 LHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFA 128          
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: GATA_ACIB3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AB307-0294) GN=gatA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.327e-13
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  147 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWS 530
            +   +I++L     Q K +SR+L E YL  I +++P +   + V P+ AL +AD AD   K   AG+   L GIP+  KD   TK  + TTAGS  L   + P DA VV K + AG + LGK ++ E++
Sbjct:    4 LHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFA 128          
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: GATA_GRABC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=gatA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.843e-13
Identity = 47/129 (36.43%), Postives = 75/129 (58.14%), Query Frame = 3
Query:  147 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWS 530
            + + TI + +   +  + ++R+L + +LG I  LNP L+  I V PD A +QA  AD   +V A+G    L GIP+  KD   ++  + TTAGS  L   V P ++ V  ++ + GA+ILGKA+L E++
Sbjct:    4 LTDLTIAEARDGLRAKRFSARELTDAHLGAIEALNPRLNAYITVTPDQARAQAAAAD---RVLASGEAGALTGIPVASKDMFCSEG-IRTTAGSRILENFVPPYESAVTERMLRDGAVILGKANLDEFA 128          
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: GATA_COXBU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii GN=gatA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.155e-12
Identity = 47/129 (36.43%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  147 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWS 530
            + + TI +L+   +   ++S +L + +L  I  +NP L+  I +  + AL+QA  AD      A G    L GIPI  KD   TKD + T+ GS  L   + P DA VV +L KAGAI++GK ++ E++
Sbjct:    1 MHQKTIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARL---AKGEATSLTGIPIAQKDIFCTKD-IKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFA 125          
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: GATA_COXBR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gatA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.155e-12
Identity = 47/129 (36.43%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  147 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWS 530
            + + TI +L+   +   ++S +L + +L  I  +NP L+  I +  + AL+QA  AD      A G    L GIPI  KD   TKD + T+ GS  L   + P DA VV +L KAGAI++GK ++ E++
Sbjct:    1 MHQKTIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARL---AKGEATSLTGIPIAQKDIFCTKD-IKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFA 125          
BLAST of EY679333 vs. ExPASy Swiss-Prot
Match: GATA_COXBN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain Dugway 5J108-111) GN=gatA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.155e-12
Identity = 47/129 (36.43%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  147 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWS 530
            + + TI +L+   +   ++S +L + +L  I  +NP L+  I +  + AL+QA  AD      A G    L GIPI  KD   TKD + T+ GS  L   + P DA VV +L KAGAI++GK ++ E++
Sbjct:    1 MHQKTIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARL---AKGEATSLTGIPIAQKDIFCTKD-IKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFA 125          
The following BLAST results are available for this feature:
BLAST of EY679333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
YI01_SCHPO1.604e-3042.13Putative amidase C869.01 OS=Schizosaccharomyces po... [more]
GATA_ACIBS1.782e-1337.98Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_ACIBY2.327e-1337.98Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_ACIBC2.327e-1337.98Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_ACIB52.327e-1337.98Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_ACIB32.327e-1337.98Glutamyl-tRNA(Gln) amidotransferase subunit A OS=A... [more]
GATA_GRABC8.843e-1336.43Glutamyl-tRNA(Gln) amidotransferase subunit A OS=G... [more]
GATA_COXBU1.155e-1236.43Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_COXBR1.155e-1236.43Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_COXBN1.155e-1236.43Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-A08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679333 ID=EY679333; Name=EY679333; organism=Citrus sinensis; type=EST; length=965bp
ATCCAACTCCGAGCCAAACAAAGTGACCATCGATGCATTGCCTAAAAATG
GCTACCGCAATACTGGCCTTTTCTTTGTTTTCCCATCTGCTCCTTCCGAC
TCTTCTAGCCATATCAGCTCAGAGTAATGCCATTCATGCATTCCCAATAA
GAGAAGCAACCATCAAGGATCTCCAGCTCGCTTTCAAGCAAAACAAGCTT
ACGTCCCGGCAGCTGGTTGAATTTTACCTCGGAGAAATCCACAGGCTCAA
CCCGCTGCTTCACGGCGTCATAGAGGTGAACCCCGATGCGCTATCCCAAG
CTGATAAGGCTGACTACGAGCGCAAGGTTAAGGCAGCAGGCTCTCTGCGG
GGCTTGCACGGGATTCCGATTCTTCTTAAGGATAACATTGCAACGAAGGA
CAAGATGAACACCACTGCTGGCTCGTATGCTCTGCTCGGCTCAGTCGTGC
CCCGGGATGCTGGTGTGGTGGTGAAGTTGAGGAAAGCTGGTGCCATTATT
TTGGGAAAGGCCAGCTTGAGTGAGTGGTCTAAACTTTAGATCCTCCAAAG
CACCCAGTGGTTTCAGTGGTAGGGGGGGGGCCCAGGGAAAGAATCCATAA
TGTTCTATCAGCAAATCCTTTGTGGGTCAAGCAGTTGGCTCAGCAATTTT
CGTAACTGCAAAACTTGGGCTGCCGGGGCACTGGGGAACTGAAAAGGAAG
GGTTCCATTTCCCGGTCCGTCCCGTTCTTACTCCATAATGGGGACTCCAA
ACCCAACCCTTGGGTCTCCACCAGCAAAAACCCGGGGTTATTCCCAAAAA
CTCCCAAAAAACTGGAGCTCCGGTGGGGGCTTATTATGCAAAAAAGTAAA
ACGGATGCCTGGTTTTTTTTTTCCAAATGGGCCTTTTGACGGGGTTTTTG
TTTCTTATACAAATACCCGCGAACCCAGGGGGGCTATCACTTCTAAAATA
AAAATTTCCCCCCGG
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