EY679328

Overview
NameEY679328
Unique NameEY679328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1106
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679328 vs. ExPASy Swiss-Prot
Match: SUOX_ARATH (Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.065e-18
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 1 
Query:  307 MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALI 420
            MPG+  PS YSQEPPRHP L++N+KEPFNAEPPRSAL+
Sbjct:    1 MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALV 38

HSP 2 Score: 41.9726 bits (97), Expect = 8.065e-18
Identity = 26/67 (38.81%), Postives = 33/67 (49.25%), Query Frame = 2 
Query:  431 VTPVDFFYKINHGPFPKIDDI*KLLLSQYVVKFEKFPKN--LV**RKFRKLPKNNITAPFAGCGKQK 625
            VTPVD FYK NHGP P +D      L  Y V      +N   +  +  R LPK N+TA     G ++
Sbjct:   42 VTPVDLFYKRNHGPIPIVDH-----LQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGNRR 103
The following BLAST results are available for this feature:
BLAST of EY679328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SUOX_ARATH8.065e-1876.32Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-A03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679328 ID=EY679328; Name=EY679328; organism=Citrus sinensis; type=EST; length=1106bp
GGACAAAATCCGAACCGCAGGACGGTTCGGATTCCGGGTCGACCACGCGT
CCGAAACGACGCGTCACAACTCCGCAGTAACAGATCACCTTTGCGAGCAT
CGCCAGTCGTCGGCATCGAGGAGATTCGGTCACGCTACCAACGAAAGTGG
GGCTCACCACGGCCTTCCACGTCAGCATTGGCATCTTTCCTTATTCCCCA
TAACCATTGATCGCCACTAATAAGAAGTCGCAATCACGATTCACAAAAAA
CGCAAACTTAAGAAAGCTTTCGACTCCAGTGAAGGAGAGAAGAAGAAGCT
TCGACTATGCCGGGACTAACAGCACCATCAAGTTACTCTCAAGAGCCGCC
TCGTCATCCTATCCTTCAAATTAATTCCAAGGAACCATTCAATGCGGAGC
CGCCGCGGTCGGCCTTGATTTTCATCTTAAGTGACGCCTGTTGATTTTTT
CTACAAGATAAATCATGGCCCATTTCCGAAAATTGATGATATTTGAAAGC
TATTATTGTCTCAATATGTGGTTAAATTTGAAAAATTTCCAAAAAACCTG
GTTTAATGAAGGAAATTTCGGAAGCTCCCCAAAAACAACATCACTGCCCC
CTTTGCAGGGTGCGGGAAACAAAAGGAACAACCGATAAACAAATGTTAAA
ACAGAAAAACAGGAGTTGAATTGGATATGATTAGGCTAAACAAAAAAATA
AAGTTTGGAAAAGTAGACAAATATGAAAAAATGATCTTTAATACAGGATG
GGAAAAACAAAATTGGAAATAAAGTACATCAGAGCCAAGTGGAAAATATA
TTGAGACATCTTTTAATATTATATGATTATGAGGTAAATGGAATATAAGT
GGAGGATGCTATTATTAAAAATATTAATTGATCATAATCAACAATAAGTA
AAGTAAACTAGTGATGAAGAGTAATACGGATAATATTCAGAAACGGAAAT
TAAAAAAGAAAACGAAAATATAGCCTCTGAAAAATTTAAGCAGTATTGAT
AAGAGGGATCTGTTAAATAACAGTTATTGATAATCTATGAGAATTAAACG
GGATAAGTGCGGTAAACTAGAATATAAACTGGATGTTTACACAAACGCAA
ATGATT
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