EY679326 | Citrus Genome Database

Overview


Name	EY679326
Unique Name	EY679326
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	947

Libraries


Library Name	Type
Sweet orange leaf, infected with CiLV	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM3_PETHY (Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.599e-63
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 1.599e-63
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

HSP 3 Score: 70.0922 bits (170), Expect = 2.114e-11
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 3

Query:   45 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 341
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M    +    EE  +       +  NG
Sbjct:   73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMANRRRRRIEESKRSVNSNISRSNNG 172

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.606e-63
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 1.606e-63
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 221.861 bits (564), Expect = 1.606e-63
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 1.606e-63
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_CAPAN (Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3)

HSP 1 Score: 221.861 bits (564), Expect = 1.606e-63
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 1.606e-63
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.606e-63
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 1.606e-63
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.606e-63
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 1.606e-63
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.606e-63
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 1.606e-63
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.606e-63
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 1.606e-63
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM2_ARATH (Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 PE=1 SV=3)

HSP 1 Score: 221.861 bits (564), Expect = 3.561e-63
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 42.3578 bits (98), Expect = 3.561e-63
Identity = 19/22 (86.36%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMI+EADV+GD
Sbjct:  113 LGEKLTDEEVDEMIKEADVDGD 134

BLAST of EY679326 vs. ExPASy Swiss-Prot
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 3.561e-63
Identity = 110/113 (97.35%), Postives = 111/113 (98.23%), Query Frame = 3

Query:   45 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFFSAAELRLVMTNL 383
            MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF SAAELR VMTNL
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113

HSP 2 Score: 43.5134 bits (101), Expect = 3.561e-63
Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1

Query:  382 LGEKLTDEEVNEMIREADVNGD 447
            LGEKLTDEEV+EMIREADV+GD
Sbjct:  113 LGEKLTDEEVDEMIREADVDGD 134

The following BLAST results are available for this feature:

BLAST of EY679326 vs. ExPASy Swiss-Prot

BLAST of EY679326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375


Match Name	E-value	Identity	Description
CALM3_PETHY	1.599e-63	98.23	Calmodulin-related protein OS=Petunia hybrida GN=C...	[more]
CALM_LILLO	1.606e-63	98.23	Calmodulin OS=Lilium longiflorum PE=2 SV=2	[more]
CALM_EUPCH	1.606e-63	98.23	Calmodulin OS=Euphorbia characias PE=2 SV=4	[more]
CALM_CAPAN	1.606e-63	98.23	Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3	[more]
CALM_BRYDI	1.606e-63	98.23	Calmodulin OS=Bryonia dioica PE=2 SV=2	[more]
CALM7_ARATH	1.606e-63	98.23	Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 ...	[more]
CALM1_PETHY	1.606e-63	98.23	Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2	[more]
CALM1_DAUCA	1.606e-63	98.23	Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 ...	[more]
CALM2_ARATH	3.561e-63	98.23	Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 P...	[more]
CALM_HORVU	3.561e-63	97.35	Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-401-059-A01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY679326 ID=EY679326; Name=EY679326; organism=Citrus sinensis; type=EST; length=947bp
GAAAAAAAAAAACCTAGTTTTCAGTTGAAAAAAAAAAGAAGAAAATGGCG
GATCAGCTCACCGACGATCAGATCTCCGAGTTCAAAGAAGCCTTCAGCTT
GTTCGACAAGGACGGCGACGGTTGCATTACCACCAAGGAGCTTGGTACTG
TTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCTTCTCA
GCTGCTGAGCTGCGCCTTGTGATGACAAACCTTAGGGGAGAAGCTTACTG
ATGAGGAAGTCAATGAGATGATAAGGGAAGCTGATGTCAATGGTGATTGG
CCAGATAAATTACGAGGGAATTTGTCGAGGTTATGATGGCTAAGTAAGTG
ACTCCACCAAACAAAAACTTCCTGGGAAAAGAAAAAAATTGTTGATTAAA
AATAATTGGGTCCCTAAATTCATTTTTTTAAAAATTTTATTTTAAAAATT
CTGGAAGGACTTGTTAATGGAACCAGGTGGTCCCCTGCTTACAATATGGC
TTGGGGGCTAGGAACACTTTTTCAGATTTCTAAAGGTTTAAGTTTTTTTC
CGCCTCCTCTGGGAAACTTTGCTTCGGGTTAAAGAGTGGTATCCAAGAAA
GCGGCCCAAATAATGAATACAAATGATATTTTATTGTACATATAAACCGA
GAGAGATTATAGTATAAAATTTTAGTTGAGATATTTGTAAAGATGATTAT
GATAATAATAAAAAAAAAATAATATAGATCAGTATAATAGATGAAAATTC
GAATATGGGTTGTTGCTTTTTTTAATAAAAAGGTTCACATATGTGCA