EY744644

Overview
NameEY744644
Unique NameEY744644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1014
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744644_ssr135 microsatellite EY744644_ssr135:135..149. BLAST: Citrus ESTs to Prunus persica proteins V1
EY744644_ssr922 microsatellite EY744644_ssr922:922..933. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY744644 vs. ExPASy Swiss-Prot
Match: ARG2_PHAAU (Indole-3-acetic acid-induced protein ARG2 OS=Phaseolus aureus GN=ARG2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.840e-17
Identity = 48/94 (51.06%), Postives = 57/94 (60.64%), Query Frame = 2 
Query:  167 MARSFSNAKLFSAFVADGISNAIYKRGYSAASQXXXXXXXXXXXXXXXMLKKPAEEMTGSSEKVSWVPDPVTGVYRPENLANELDGADLRAHVL 448
            MARSF+N K+ SA VADG SN   + G++AA+                M+ K  EE     EKVSWVPDPVTG YRPEN  NE+D AD+RA VL
Sbjct:    1 MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVL 93
The following BLAST results are available for this feature:
BLAST of EY744644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ARG2_PHAAU2.840e-1751.06Indole-3-acetic acid-induced protein ARG2 OS=Phase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-H07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744644 ID=EY744644; Name=EY744644; organism=Citrus sinensis; type=EST; length=1014bp
CCACGCGTCCGAAACCAAACGCTTTGAGGGGATTTTCGCGCTACGAAGAG
GGAAGTTTCTTTAGCTGCTGTTGAAGGCTTTTCGATAGAAAGAATAGAAG
GAAATTGCTTTCTGCAGCAGCGTTAAGATCTCTTATCATCATCATCATCC
CACATAACTAAGAAAAATGGCTCGCTCTTTCTCAAACGCTAAGCTTTTCT
CTGCTTTCGTCGCTGACGGAATCTCTAACGCCATCTACAAAAGAGGATAC
TCGGCGGCATCACAAGGCGCTGTGTCGCGGGCAACAGGGGGAGCTAGGAG
TGCTGCTGCGATGTTGAAGAAACCAGCAGAAGAGATGACAGGATCCAGTG
AGAAGGTCTCGTGGGTCCCAGACCCAGTCACTGGTGTCTACAGGCCGGAG
AATCTCGCCAACGAGCTCGATGGGGCCGACCTCAGAGCCCATGTTCTTGA
AGCACAACAACTGATCATCAAAATTAATAAGTATTATTTATTAAATATAT
ATTAATTCGGACTGGGAAACTGAGGGAAGGACGAAAGAAAAATTAAAAAA
AAGATTAAAAAGGGGAATTTGGTTCCGGAGGGGGCCAGCCCCATTAACTC
CTCCAAGGAATTCCCCGGAAAATTGGCGTTAACGCTGGCACCTCCCCCGG
TCCCCCTCGGTTTTTGGCTTGGGGGGATCCCAACAAAATTTTTGGAATTG
GCAGGGAAACATTCCCGGTTTTTTTGTGTTCGCCCTTTTTTTCGAAAAAT
AAAAAAAGAAATTTTTATTTTTCACATTCTTGAAGAAAAAAAAAAAAAAA
AAAAAAAAGGGGGGGGGGCGCGCCTCAAAGGAGAACAAGGGCTTCACCGT
AACGCGGGGCTGCGGAAAAGACCCAACAACTTTTTTTATAAAAGGGGGCC
CCCTAAAATTCTTCAATGCCCGGCGGGCGGGCGCGCGTTTTTCTAAAAAC
ACCGGCAGCGGGGGGGGGGAAAAAAAACACCCCGTGGGGGAAATCACCAA
ACAAGAAAAAAATA
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