EY679290

Overview
NameEY679290
Unique NameEY679290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.430e-65
Identity = 136/242 (56.20%), Postives = 161/242 (66.53%), Query Frame = 3
Query:   18 MSVSLNANLYQPSLS--CNLKLFSGLKIQSPSLFFYCPXXXXXXXXXXXXGC*FPPSPRRNAFVGVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            M+VS N  L+QPSLS  C++KL+SGLK QS S                                    +G  NL+ EFYGRV+KSL SG    K  R R+ MMPIGTP+V YR   EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD++DDS+RIY+Y NGPGGD+TP+LAIYDTM+SLK+PVGTH VG  Y+L GFLL       R  MP S+I L+ P  G  RGQ ++I
Sbjct:    1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFL---------------------------------ASGYQNLNKEFYGRVYKSLQSG--TGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSP-AGAARGQADDI 206          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.358e-33
Identity = 72/140 (51.43%), Postives = 91/140 (65.00%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG PKV YR PGE   QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D  K I LY N PGG VT  +AIYDTMQ +K+ V T  VG    +  FLL       R  +P S+I++  P  G  RGQ  +I
Sbjct:    1 MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPS-GGTRGQATDI 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.010e-31
Identity = 70/140 (50.00%), Postives = 90/140 (64.29%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K IYLY N PGG VT  LAIYDTMQ +K+ V T  VG    +  FLL       R  +P S+I++  P  G  RGQ  +I
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPS-GGTRGQATDI 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.932e-31
Identity = 70/140 (50.00%), Postives = 90/140 (64.29%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K IYLY N PGG VT  LAIYDTMQ +K+ V T  VG    +  FLL       R  +P S+I++  P  G  RGQ  +I
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPS-GGTRGQATDI 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.677e-30
Identity = 66/140 (47.14%), Postives = 92/140 (65.71%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ + SK +Y+Y N PGG VT  +A+YDTM  +K  V T  VG    +  F+L       R  +P S+I++  P  G  RGQ +E+
Sbjct:    1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKSKDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPHSRIMIHQPE-GGSRGQASEV 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.157e-29
Identity = 67/140 (47.86%), Postives = 91/140 (65.00%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG PKV YR PG G  QW+D++N L  +R+IF+G+ +D+E +N I+A+MLYLDS D  K I+LY N PGG V+  LAIYDTMQ ++  V T  VG    +  FLL       R+ +P S+I++  P LG  +GQ  +I
Sbjct:    1 MPIGIPKVPYRLPG-GQSQWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQP-LGGAQGQATDI 138          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_CHLVU (ATP-dependent Clp protease proteolytic subunit OS=Chlorella vulgaris GN=clpP PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.277e-29
Identity = 63/140 (45.00%), Postives = 91/140 (65.00%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q +D+E +NQ++  MLYL++ + +K +Y+Y N PGG VT  +A+YD M  +K+ V T  VG    +  F+L       R  +P S+I++  P  G  +GQ +E+
Sbjct:    1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQNKGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPHSRIMVHQPE-GGSQGQASEV 139          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.277e-29
Identity = 65/140 (46.43%), Postives = 87/140 (62.14%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG P V YR PG    +W+D++N L  ER+IF+GQ + +  +N I+A +LYLDS D SK IYLY N PGG VT  +AIYDTMQ +K+PV T  +G    +  FLL       R  +P S+I++  P  G  R Q ++I
Sbjct:    1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDI 140          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.277e-29
Identity = 65/140 (46.43%), Postives = 87/140 (62.14%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG P V YR PG    +W+D++N L  ER+IF+GQ + +  +N I+A +LYLDS D SK IYLY N PGG VT  +AIYDTMQ +K+PV T  +G    +  FLL       R  +P S+I++  P  G  R Q ++I
Sbjct:    1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDI 140          
BLAST of EY679290 vs. ExPASy Swiss-Prot
Match: CLPP_OSTTA (ATP-dependent Clp protease proteolytic subunit OS=Ostreococcus tauri GN=clpP PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.071e-28
Identity = 60/140 (42.86%), Postives = 89/140 (63.57%), Query Frame = 3
Query:  318 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRIYLYFNGPGGDVTPTLAIYDTMQSLKNPVGTHWVGFCYHLPGFLLXXXXXXIRSEMPFSKIVLKLPRLGELRGQGNEI 737
            MPIG PKV YR PGE + QWVDL+N LYRERV+F+G  +D+E +NQ+   MLYL + D S+ ++LY N PGG VT  L+++D M  ++  V T  +GF   +  F+L       R  +P  ++++  P+ G + GQ +E+
Sbjct:    1 MPIGVPKVAYRLPGESTPQWVDLYNRLYRERVLFLGSGLDDELANQLNGIMLYLSAEDASRSLFLYINSPGGSVTAGLSVFDIMNYVQASVTTIGIGFAASMASFILAGGERGSRIALPHCRVMIHQPQ-GGMEGQASEV 139          
The following BLAST results are available for this feature:
BLAST of EY679290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPR2_ARATH1.430e-6556.20ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP2_THEEB9.358e-3351.43ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_ANASP3.010e-3150.00Probable ATP-dependent Clp protease proteolytic su... [more]
CLPP2_ANAVT3.932e-3150.00ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_OLTVI5.677e-3047.14ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_GLOVI2.157e-2947.86ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_CHLVU6.277e-2945.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNE76.277e-2946.43ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNP66.277e-2946.43ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_OSTTA1.071e-2842.86ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-058-E11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679290 ID=EY679290; Name=EY679290; organism=Citrus sinensis; type=EST; length=924bp
CACGCGTCCGGCTAAACATGTCCGTTTCGCTTAACGCAAACTTATATCAA
CCTTCTCTGAGCTGTAACCTCAAGCTTTTTTCTGGATTAAAGATTCAATC
ACCAAGTTTGTTCTTTTACTGTCCTTCTTTGTTCAATTTTATTCTCTCAC
TGAGCTTTCTCGGTTGTTGATTCCCCCCTTCCCCCCGGCGGAATGCTTTT
GTAGGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCTGAATTCTATGG
CAGAGTTCATAAGAGCCTCTACTCCGGCATTCGTAATGATAAACCAATAA
GGGGACGAATTGCAATGATGCCGATTGGGACACCAAAAGTGCTTTATAGG
ACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGGAATGCCCTATA
TCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGAAGAATTTAGCA
ACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTGATGATTCCAAA
AGGATTTATTTGTACTTCAATGGTCCCGGTGGGGATGTTACTCCCACCTT
GGCAATTTACGACACTATGCAAAGCTTGAAGAATCCTGTTGGCACTCACT
GGGTGGGCTTTTGCTATCATTTACCAGGTTTTCTTCTAAAAGGGGGAAAA
AAGGGAATCCGGTCGGAAATGCCTTTTTCAAAAATTGTTTTAAAACTCCC
CCGCTTGGGGGAACTCCGGGGTCAGGGTAATGAAATTTTCTAATGAAACA
AAAAGAATTTCTTAAAAACAAAAAAATTATTTTTAAAGGGGTTTTTTTAA
AAAAAAAAGGGTATCCCCTTTTTAAAAAAAAAAAAAAAAAGAAATAAAAA
AAGAAATAAAACCCTTTTTGTTTTCCCAAAAAAGGCTTTTGAAAAAAAGG
GGGGAAAAAAAAAAATCCTAAAAA
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