EY679282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679282 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.063e-59 Identity = 80/97 (82.47%), Postives = 91/97 (93.81%), Query Frame = 2 Query: 176 MSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPEHYPMEAPQVIFLHPSPLHPHVYSNGH 466 M+ SS+ +RKALSKIACNRLQKEL+EWQVNPP+GFKH+ TDNLQ+WVIEV GAPGTLYANETY LQVEFP+HYPMEAPQVIF+ P+PLHPH+YSNGH Sbjct: 1 MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGH 97 HSP 2 Score: 66.6254 bits (161), Expect = 9.063e-59 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 1 Query: 478 QRPEDNDRYVKNCRNGRTPKETRGWFHDDKV 570 QRP DNDRYVKNC+NGR+PKETR WFHDDKV Sbjct: 131 QRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
BLAST of EY679282 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 4.452e-58 Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 2 Query: 176 MSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPEHYPMEAPQVIFLHPSPLHPHVYSNGH 466 MS S +RK LSKIA NRLQKEL EWQ+NPP+GFKHK TDNLQRW+IEV GAPGTLYAN+TYQLQV+FPEHYPME+PQVIFLHP+PLHPH+YSNGH Sbjct: 1 MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGH 97 HSP 2 Score: 66.6254 bits (161), Expect = 4.452e-58 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 1 Query: 478 QRPEDNDRYVKNCRNGRTPKETRGWFHDDKV 570 QRP DNDRYVKNC+NGR+PKETR WFHDDKV Sbjct: 131 QRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
BLAST of EY679282 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 9.867e-58 Identity = 77/97 (79.38%), Postives = 89/97 (91.75%), Query Frame = 2 Query: 176 MSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPEHYPMEAPQVIFLHPSPLHPHVYSNGH 466 M+ SS +RKALSKIACNRLQKEL+EWQ+NPP+GF+HK TDNLQ+W I+V GAPGTLYANETYQLQVEFPEHYPMEAPQV+F+ P+P HPH+YSNGH Sbjct: 1 MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGH 97 HSP 2 Score: 66.6254 bits (161), Expect = 9.867e-58 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 1 Query: 478 QRPEDNDRYVKNCRNGRTPKETRGWFHDDKV 570 QRP DNDRYVKNC+NGR+PKETR WFHDDKV Sbjct: 131 QRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161
BLAST of EY679282 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.160e-54 Identity = 78/97 (80.41%), Postives = 87/97 (89.69%), Query Frame = 2 Query: 176 MSGSSTTTRKALSKIACNRLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPEHYPMEAPQVIFLHPSPLHPHVYSNGH 466 M+ SS +TRK L+KIA NRLQKE EWQ NPPSGFKH+ +DNLQRW+IEV+G PGTLYANETYQLQVEFPEHYPMEAPQVIF HP+PLHPH+YSNGH Sbjct: 1 MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGH 97 HSP 2 Score: 55.8398 bits (133), Expect = 2.160e-54 Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 1 Query: 478 QRPEDNDRYVKNCRNGRTPKETRGWFHDDKV 570 Q+P+DND Y+KNC++GR+PKETR FHDDKV Sbjct: 131 QKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161
BLAST of EY679282 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.263e-22 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 230 RLQKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPEHYPMEAPQVIFLHPSPLHPHVYSNGHNLLS 478 RLQKEL + + NPP DNL +WVI V+G G++Y E ++LQ +F YP+++P+VIF+ P+HPH+YSNGH LS Sbjct: 8 RLQKELLDLKTNPPPCISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLS 90 HSP 2 Score: 32.7278 bits (73), Expect = 5.263e-22 Identity = 15/30 (50.00%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 481 RPEDNDRYVKNCRNGRTPKETRGWFHDDKV 570 RP D+ +YV N ++PKE R FHDD V Sbjct: 121 RPTDDSKYVSRVLN-KSPKEVRWMFHDDTV 149
BLAST of EY679282 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.321e-21 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 2 Query: 230 RLQKELAEWQVNPPSGF---KHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPEHYPMEAPQVIFLHPS-PLHPHVYSNGHNLLS 478 RLQKEL Q +PP G + +++ +W++++ GAPGTLY E +QL +F YP ++PQV+F + P+HPHVYSNGH LS Sbjct: 7 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLS 93 HSP 2 Score: 36.965 bits (84), Expect = 4.321e-21 Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 478 QRPEDNDRYVKNCRNGRTPKETRGWFHDD 564 +RP DN YV+ C + PK+T+ W+HDD Sbjct: 123 RRPPDNSFYVRTCN--KNPKKTKWWYHDD 149
BLAST of EY679282 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.622e-21 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 2 Query: 230 RLQKELAEWQVNPPSGF---KHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPEHYPMEAPQVIFLHPS-PLHPHVYSNGHNLLS 478 RLQKEL Q +PP G + +++ +W++++ GAPGTLY E +QL +F YP ++PQV+F + P+HPHVYSNGH LS Sbjct: 7 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLS 93 HSP 2 Score: 36.965 bits (84), Expect = 5.622e-21 Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 478 QRPEDNDRYVKNCRNGRTPKETRGWFHDD 564 +RP DN YV+ C + PK+T+ W+HDD Sbjct: 123 RRPPDNSFYVRTCN--KNPKKTKWWYHDD 149
BLAST of EY679282 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 3.545e-20 Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 230 RLQKELAEWQVNPPSGF---KHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPEHYPMEAPQVIFLHPS-PLHPHVYSNGHNLLS 478 RLQKEL Q +PP+G + + + W I++ GA GT+Y E +QL +F YP E+PQV+F + P+HPHVYSNGH LS Sbjct: 7 RLQKELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLS 93 HSP 2 Score: 38.1206 bits (87), Expect = 3.545e-20 Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 478 QRPEDNDRYVKNCRNGRTPKETRGWFHDD 564 +RP DN YVK C + PK+T+ W+HDD Sbjct: 123 RRPPDNSFYVKTCN--KNPKKTKWWYHDD 149 The following BLAST results are available for this feature:
BLAST of EY679282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679282 ID=EY679282; Name=EY679282; organism=Citrus sinensis; type=EST; length=998bpback to top |