EY679276

Overview
NameEY679276
Unique NameEY679276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1017
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.561e-47
Identity = 68/94 (72.34%), Postives = 86/94 (91.49%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKVE 422
            Q+VGWPP+RS+RKN+LAT+ KN+DEVDG+ GS ALFVKVSMDGAPYLRKVDL++Y+ Y ELSSALEKMF+ FT+GQ GS+GA G++MLSE+K++
Sbjct:  183 QIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLK 276          

HSP 2 Score: 61.6178 bits (148), Expect = 7.561e-47
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 1
Query:  409 KAKLKDLLHGS*FVLTYEDKDGDWMLVGDVPCDMYI 516
            + KLKDLL+G  +VLTYEDKDGDWMLVGDVP +M+I
Sbjct:  272 ETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFI 307          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.252e-39
Identity = 66/102 (64.71%), Postives = 79/102 (77.45%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSSK----NN---DEVDGKAGSS--ALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKV 419
            QVVGWPPIRSFRKNS+A+S      NN   +E + K+G     L+VKVSM+GAPYLRK+DLK Y  Y ELSSALEKMFSCFTIGQ+GSHG  GR+ L+ES++
Sbjct:  143 QVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRL 244          

HSP 2 Score: 56.225 bits (134), Expect = 2.252e-39
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 1
Query:  409 KAKLKDLLHGS*FVLTYEDKDGDWMLVGDVPCDMYI 516
            +++L DLL GS +V+TYEDKD DWMLVGDVP +M+I
Sbjct:  241 ESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFI 276          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 6.798e-35
Identity = 63/100 (63.00%), Postives = 72/100 (72.00%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSS-KNNDEVDG---KAGS---SALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKV 419
            QVVGWPP+RS+RKN LA  + K  D  DG   K+G+   +A FVKVSMDGAPYLRKVDLK Y  Y ELS ALEKMFS FTIG  GSHG  G   ++ESK+
Sbjct:  120 QVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG---MNESKI 216          

HSP 2 Score: 57.3806 bits (137), Expect = 6.798e-35
Identity = 24/36 (66.67%), Postives = 32/36 (88.89%), Query Frame = 1
Query:  409 KAKLKDLLHGS*FVLTYEDKDGDWMLVGDVPCDMYI 516
            ++K+ DLL+GS +V TYEDKDGDWMLVGDVP +M++
Sbjct:  213 ESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFV 248          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.354e-34
Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATS-SKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKVE 422
            QVVGWPPIRS+RKN++A+S SKN DEVDGK G   LFVKVSMDGAPYLRKVDL+ Y+ YQ+LSSALEKMFSCFT+GQ G HGA GRE +SE K++
Sbjct:  165 QVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLK 259          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.346e-32
Identity = 54/108 (50.00%), Postives = 74/108 (68.52%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLA-------TSSKNNDEVDGKAGSSA--------LFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKV 419
            QVVGWPP+RSFRKN ++        +++ ND+  G +G+++         +VKVSMDGAPYLRK+DLK Y  YQ+LS+AL KMFS FTIG YG  G   ++ ++ESK+
Sbjct:   70 QVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKL 175          

HSP 2 Score: 57.3806 bits (137), Expect = 1.346e-32
Identity = 25/36 (69.44%), Postives = 32/36 (88.89%), Query Frame = 1
Query:  409 KAKLKDLLHGS*FVLTYEDKDGDWMLVGDVPCDMYI 516
            ++KL DLL+GS +V TYEDKDGDWMLVGDVP +M++
Sbjct:  172 ESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFV 207          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.281e-32
Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSSKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKV 419
            QVVGWPP+RSFRKN LA      +E +  +  +A FVKVSMDGAPYLRKVDLK Y  Y+ELS +L KMFS FT G   S G   ++ ++ESK+
Sbjct:   90 QVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGM--KDFMNESKL 180          

HSP 2 Score: 56.225 bits (134), Expect = 2.281e-32
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 1
Query:  409 KAKLKDLLHGS*FVLTYEDKDGDWMLVGDVPCDMYI 516
            ++KL DLL+ S +V TYEDKDGDWMLVGDVP +M++
Sbjct:  177 ESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFV 212          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.451e-31
Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSSKNN-DEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKV 419
            QVVGWPP+R++RKN +A       +E     G +  FVKVSMDGAPYLRKVDLK Y+ Y++LS AL KMFS FT+G YG+ G +  + ++ESKV
Sbjct:   76 QVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMI--DFMNESKV 167          

HSP 2 Score: 51.9878 bits (123), Expect = 1.451e-31
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 1
Query:  409 KAKLKDLLHGS*FVLTYEDKDGDWMLVGDVPCDMYI 516
            ++K+ DLL+ S +V +YEDKDGDWMLVGDVP  M++
Sbjct:  164 ESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFV 199          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.156e-31
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATSS-KNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSE 410
            QVVGWPP+RS+RKN+LA S+ K   E  GK+     +VKVSMDGAPYLRKVDLK YS Y++LS ALEKMFSCF  G+  SH    R+ L++
Sbjct:  127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTD 217          

HSP 2 Score: 45.8246 bits (107), Expect = 4.156e-31
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 1
Query:  424 DLLHGS*FVLTYEDKDGDWMLVGDVPCDMY 513
            D L    +VLTYEDKD DWMLVGD+P D++
Sbjct:  222 DALKDQEYVLTYEDKDADWMLVGDLPWDLF 251          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.415e-31
Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATS-SKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLS 407
            QVVGWPP+R++RKN+LA S SK   E  G A    L+VKVSMDGAPYLRKVDLK YS Y++LS ALEKMFSCF  GQ G   +  R+ L+
Sbjct:  117 QVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLT 206          

HSP 2 Score: 46.2098 bits (108), Expect = 5.415e-31
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 1
Query:  424 DLLHGS*FVLTYEDKDGDWMLVGDVPCDMY 513
            D L    +VLTYEDKD DWMLVGD+P D++
Sbjct:  212 DALQDQEYVLTYEDKDADWMLVGDLPWDLF 241          
BLAST of EY679276 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 5.415e-31
Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 3
Query:  141 QVVGWPPIRSFRKNSLATS-SKNNDEVDGKAGSSALFVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLS 407
            QVVGWPP+R++RKN+LA S SK   E  G A    L+VKVSMDGAPYLRKVDLK YS Y++LS ALEKMFSCF  GQ G   +  R+ L+
Sbjct:  118 QVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLT 207          

HSP 2 Score: 46.2098 bits (108), Expect = 5.415e-31
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 1
Query:  424 DLLHGS*FVLTYEDKDGDWMLVGDVPCDMY 513
            D L    +VLTYEDKD DWMLVGD+P D++
Sbjct:  213 DALQDQEYVLTYEDKDADWMLVGDLPWDLF 242          
The following BLAST results are available for this feature:
BLAST of EY679276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
IAA9_ARATH7.561e-4772.34Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA27_ARATH2.252e-3964.71Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA30_ORYSJ6.798e-3563.00Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA8_ARATH3.354e-3474.74Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
IAA16_ARATH1.346e-3250.00Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]
AUX28_SOYBN2.281e-3256.99Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA14_ARATH1.451e-3155.32Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
IAA19_ORYSJ4.156e-3160.44Auxin-responsive protein IAA19 OS=Oryza sativa sub... [more]
IAA5_ORYSJ5.415e-3162.22Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA5_ORYSI5.415e-3162.22Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-058-D07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679276 ID=EY679276; Name=EY679276; organism=Citrus sinensis; type=EST; length=1017bp
TCCGGGGCCTCAAACCGCTAAAGGCCCTTTAGATGGCCAACCAAAAAGCA
GTGCAGGAAAGGCCTCATGCTAACAATGAGACCATAACAAACCATAATGG
TTCTGCAAGTAACAGTAGCAGTGCACCTGCTGCCAAGGCACAGGTTGTGG
GTTGGCCACCAATTAGATCATTTAGGAAGAATTCATTGGCCACTTCGTCT
AAAAATAATGACGAAGTAGATGGAAAAGCAGGTTCCAGTGCTCTGTTTGT
CAAGGTCAGCATGGATGGTGCTCCTTATTTAAGAAAAGTGGACTTGAAAA
ATTACTCTAAATATCAGGAACTATCTTCTGCCCTTGAGAAGATGTTCAGC
TGCTTTACAATTGGGCAATATGGATCTCATGGGGCTCTGGGCAGGGAGAT
GCTGAGTGAAAGCAAAGTTGAAGGATCTGCTACATGGCTCATAATTCGTT
CTCACTTATGAAGACAAAGATGGGGATTGGATGCTTGTGGGTGATGTCCC
CTGTGATATGTATATTTGATACATGCAAGAGGTTGAGGAATATTAAGAGC
ACCTGATGCCATTGGCCTAATCGCCCAAGGGCTTGTGGAGAAATGCCCGG
AACCAAAACCAAGCATATGGTTCAACATAATTGTTGGGCATTCATCCCAT
CAAATTTTCGGTGGATAAAAATACTTGGGCAAATAACAAAAAAAAAAATG
GAAACAAATTCAATGCTTAGGGGATGTTGGGAAGGCACCCGCTTTTTCCT
GTGTTACCCCCATTAATACCTTTTACATGGCGATGAATTTTCTCAGGTTC
TCTGTAGCCAACTGTATTGTTGACTTTTTCAATTTTAAAATTCTTAATAC
ACAAACGTAAAAAACCATTTTCTTTTTTTCGAATTAGAAACCCTTCATCA
AAAAATAGGTTTTCCCCCCCTATAAGAAATTTTCTGAATAAATAATTTTA
TTTGTTTTCTTTACAAACACGGAATCGCCTAAAATTATTTTACTGGCACA
TAAGGAGACGTACCTTG
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