EY679269

Overview
NameEY679269
Unique NameEY679269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.397e-23
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 3
Query:   93 MAKMSLIFSLFVGLLMVV----LVSSAKFDDLYQTSWVFDHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVST 362
            M  M L   + + +++VV     VS AKFD+LY++SW  DH   +G+  KL LDNYSGAGF S+SKYLFGKVSIQIKLV GDSAGTVTAFY+S+
Sbjct:    1 MVGMDLFKCVMMIMVLVVSCGEAVSGAKFDELYRSSWAMDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSS 94          
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.120e-15
Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 3
Query:  105 SLIFSLFVGLLMVVLVSSAKFDDLYQTSWVFDHV-QYDGD-TLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVST 362
            +L   LF  L   V+   AKF+D ++ +W   H+ Q DG   ++L LD  SG GFASK +YLFG+VS++IKL+ GDSAGTVTAFY+++
Sbjct:   14 TLSLCLFAALYQPVMSRPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNS 101          
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.505e-14
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 3
Query:  177 YQTSWVFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVST 362
            Y  +W FDH++Y   G  ++L+LD Y+G GF SK  YLFG  S+ IKLV GDSAGTVTAFY+S+
Sbjct:   35 YVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSS 98          
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.884e-14
Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 3
Query:  162 KFDDLYQTSWVFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVST 362
            +F   Y  +W FDH++Y   G  ++L+LD Y+G GF SK  YLFG  S+ IK+V GDSAGTVTAFY+S+
Sbjct:   32 QFGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSS 100          
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.884e-14
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 3
Query:  111 IFSLFVGLLMVVLVSSAKFDDLYQTSWVFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVST 362
            IF+L   + + V    A F + ++ +W   H++   DG  ++L LD  +G GFASK KYLFG+VS++IKL+ GDSAGTVTAFY+++
Sbjct:   17 IFTLLTLMFIRVSARPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNS 102          
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.236e-13
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 3
Query:  177 YQTSWVFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVSTH*QQFCR*PTQLNLVYLVNHDGGGDLIQ 446
            Y  +W FDH++Y   G  + L LD Y+G GF SK  YLFG  S+ IK+V GDSAGTVTAFY+S+   +      +++  +L N  G   ++Q
Sbjct:   36 YFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEH----DEIDFEFLGNRTGQPYILQ 123          
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.920e-13
Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 3
Query:  177 YQTSWVFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVSTH 365
            Y+ SW   H++Y   G T+ L LD  SGAGF SK  YLFG  S+++KLVGGDSAG VTAFY+S++
Sbjct:   36 YEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSN 100          
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.506e-13
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  165 FDDLYQTSWVFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVSTH*QQFCR*PTQLNLVYLVNHDGGGDLIQ 446
            FD  Y  +W  DH+ Y   G  ++L+LD  +G GF ++  YLFG  S+ IKLVGGDSAGTVTAFY+S+   +      +++  +L N  G   ++Q
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEH----DEIDFEFLGNRTGQPYILQ 123          
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.506e-13
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 3
Query:  120 LFVGLLMVVLVSSA-----------KFDDLYQTSWVFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVST 362
            L + L++V L SSA            F   Y  +W FDH++Y   G  ++L+LD Y+G GF +K  YLFG  S+ IK+V GDSAGTVTAF +S+
Sbjct:    6 LILCLVLVSLASSALCAAPRRPVDVPFGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSS 99          
BLAST of EY679269 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.229e-12
Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 3
Query:   87 SSMAKMSLIFSLFVGLLMVVLVSSAKFDDLYQTSWVFD--HVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYVST 362
            S++  MS+  SLF+GL ++++V    F+     +W     ++  +G  L L LD  SG+GF SK++YL+GKV +QIKLV G+SAGTVT FY+ +
Sbjct:    4 STLLVMSI--SLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKS 95          
The following BLAST results are available for this feature:
BLAST of EY679269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
XTH9_ARATH1.397e-2360.64Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH7_ARATH3.120e-1550.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN4.505e-1457.81Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_SOYBN5.884e-1453.62Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH6_ARATH5.884e-1446.51Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH2.236e-1343.48Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC2.920e-1356.92Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT6.506e-1341.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN6.506e-1344.68Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH3.229e-1243.62Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-058-C11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679269 ID=EY679269; Name=EY679269; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGCTTCAACTTCCCTCCACTTCACTGGGCTTGCTCTGCTCA
TTCGCTTACTTCCTCTCCCCGTTCTTCTGTCTTCATTCTTCAATGGCTAA
AATGTCTTTGATTTTCAGTCTGTTTGTGGGTCTTTTAATGGTGGTTTTGG
TCAGCTCAGCTAAGTTTGATGATCTTTATCAAACAAGCTGGGTTTTTGAT
CATGTTCAGTATGATGGGGACACTCTCAAGCTTAACCTCGATAATTATTC
CGGAGCTGGGTTTGCGTCAAAGAGCAAGTATTTGTTTGGGAAAGTCTCCA
TCCAAATTAAACTTGTAGGGGGTGACTCTGCTGGAACTGTCACTGCCTTC
TATGTAAGCACACACTAACAACAATTCTGCAGATAACCAACTCAACTCAA
CCTGGTTTACTTGGTTAATCATGATGGGGGAGGGGACCTCATTCAATAAT
GTCACTTACTACTCTATTCAGTATTCTTCATCCAAAGCTTTGATAAACTT
GACATTTGCAAGCAAAAAAAAAAAAAAATCCTGGCTTTTATATGCATTCT
AAAATAACAAATGCTAGTAAGTAGTAAACCCCACCCCCTACCAACAGCTA
CGGTTGGTCTCCCTCGTGCAACTCATTAAGGCCCATAAATTTCCGGCATT
TTCTCCTCTAATCCTCCCCAACTTCCCACCCCCGTGACCCCAAAATTTTT
GGTTCCCCCCTTAACTTTTTCCCTTGTTCCATAACCTTGGGTTACCCCCC
ATTGAAAACCCAAAAATCTAATTAAAACTGGGAAAATTGTGCCCAAACCG
GGAAAGGGAGGGGGGTTTTTATTTTAAAAAACATTTTTAAACTTTGTATT
TTTTTAATTTTTTAAAACCCAAATGTTCATTAAAAGAGGGGCCCAAATAA
CAAACGCAATTTTTTATTTTTTTGATTTTTCTGGGGGGGAA
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