EY679242

Overview
NameEY679242
Unique NameEY679242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679242 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.182e-15
Identity = 60/218 (27.52%), Postives = 105/218 (48.17%), Query Frame = 3
Query:   21 GRASVMAPRARIAVYKALYRLFGGFXXXXXXXXXXXXXXGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLL---DSSVMKYSASDCQKP*MLNKNLVEGNFLSLAL--------IPSFFGTGYWLPSKKFSENTKKALAP 641
            G A    P AR+A+YK  +   G                GV+I+S+S+G      ++ +  +  F      A++ G+    +AGN GP   T+ ++ PWI TVAA+  DR +K+ ++LGNGK  +G+G+S  +   +++ LV+  D      D  + +Y  SD      L++  V+G  +   +        I S+ G G  + S ++ +N +  +AP
Sbjct:  234 GTARGAVPSARLAMYKVCWARSGCADMDILAGFEAAIHDGVEIISISIGGPIADYSSDSISVGSFH-----AMRKGILTVASAGNDGPSSGTVTNHEPWILTVAASGIDRTFKSKIDLGNGKSFSGMGISMFSPKAKSYPLVSGVDAAKNTDDKYLARYCFSD-----SLDRKKVKGKVMVCRMGGGGVESTIKSYGGAGAIIVSDQYLDNAQIFMAP 441          
BLAST of EY679242 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.469e-14
Identity = 54/175 (30.86%), Postives = 84/175 (48.00%), Query Frame = 3
Query:   21 GRASVMAPRARIAVYKALYRLFGGFXXXXXXXXXXXXXXGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVL---LDSSVMKYSASDCQKP*MLNKNLV 536
            G A    P ARIA YK  +   G                GVDI+SLSVG  +P    +  F++   +    AV+ G+  + +AGNGGP   T  S SPW+ +VAA+  DR++   + +GNG+   G+ ++  T  N+ + LV+  D+     D S  ++       P +L   +V
Sbjct:  228 GTARGGVPLARIAAYKVCWN-DGCSDTDILAAYDDAIADGVDIISLSVGGANP----RHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSIN--TFDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIV 395          
BLAST of EY679242 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.035e-11
Identity = 47/129 (36.43%), Postives = 64/129 (49.61%), Query Frame = 3
Query:   21 GRASVMAPRARIAVYKALYRLFGGFXXXXXXXXXXXXXXGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGL 407
            G A  MAPRAR+AVYK  + L G F               V++LS+S+G            +  F     AA++ G+ V+ +AGN GP   +L + +PWITTV A   DR +     LGNGK   G+ L
Sbjct:  236 GTARGMAPRARVAVYKVCW-LGGCFSSDILAAIDKAIADNVNVLSMSLGGGMSDYYRDGVAIGAF-----AAMERGILVSCSAGNAGPSSSSLSNVAPWITTVGAGTLDRDFPALAILGNGKNFTGVSL 358          
The following BLAST results are available for this feature:
BLAST of EY679242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
XSP1_ARATH1.182e-1527.52Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
CUCM1_CUCME8.469e-1430.86Cucumisin OS=Cucumis melo PE=1 SV=1[more]
SUBL_ARATH1.035e-1136.43Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-058-A06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679242 ID=EY679242; Name=EY679242; organism=Citrus sinensis; type=EST; length=1003bp
CCACGCGTCCGCATGAATTTGGGAGAGCAAGCGTTATGGCTCCCCGTGCC
AGGATTGCTGTATATAAGGCACTCTACAGGCTTTTTGGAGGCTTTGTAGC
AGATGTGGTTGCTGCAATTGATCAGGCTGTTCATGATGGTGTGGATATAC
TTAGCCTCTCCGTGGGGCCAAACAGTCCTCCAGCTACCACCAAGACCACA
TTTTTAAATCCTTTCGATGTTACGCTTCTTGCAGCTGTGAAAGCAGGTGT
ATTCGTTGCACAGGCAGCTGGAAATGGAGGTCCTTTCCCCAAAACTTTGG
TATCTTACAGTCCATGGATAACAACTGTAGCAGCTGCAATTGATGACCGC
AGATACAAAAACCATCTGAACCTGGGCAATGGAAAAATCTTAGCTGGAAT
TGGGTTGTCACCTGCGACTCATGGAAATCGAACGTTTACCTTGGTTGCTG
CAAATGATGTTCTTCTGGATTCTTCAGTAATGAAGTACAGCGCCTCAGAC
TGCCAAAAACCATAAATGTTAAACAAAAACTTGGTTGAGGGGAACTTTCT
TTCTTTGGCGCTAATTCCTTCATTTTTTGGTACTGGGTACTGGCTCCCTT
CAAAAAAGTTTTCGGAAAACACAAAAAAAGCCTTGGCCCCGCCTGGGATT
GTTTCTTTGGCTGAAAAAAATGTTTTCCCCCAAAAAACAAAATTTTGGTC
CCTGTTTCCCGTTTGGGATATCCCTGGAAAAACTTATCAAAAAAATGTCA
CAAAAAACAAATGGGATTTTGTGTAAACAAATTAACAACACCCCCTCTAA
CAAAAAGGAAAAGGGGGACGGGGAAAAGAGGAAAAATTTTTTAAAAGGGG
ACAAGGGGTACACCTAAAGGAGAAGGGGTGTTTGAAACCCCATTTTTCTT
CCCAAAAGAACTCCCCCCCCCCCATGGGGGGGGGGCATTTTTTTTTTTTC
TTCTCTCCTCGAGGGGGCCCCCCACATAATAAAAAAGAAAAAATTGTTAC
CTT
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