EY679237

Overview
NameEY679237
Unique NameEY679237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.151e-21
Identity = 57/115 (49.57%), Postives = 67/115 (58.26%), Query Frame = 1
Query:   52 NFHNYTVGQFKHLLGVKPTPKGLLLGVPVKTH----DKSLKLPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHFGMNLSLSVN--DLLTCSGFLSEDG*DGG 378
            NF+N  V   K L G         LG P         + LKLP+SFDAR  WPQC TI  I  QG CGSCWAFGA EA+SDR CIH   ++S+ V+  DLLTC G +  DG +GG
Sbjct:   46 NFYNVDVSYLKRLCGT-------FLGGPKPPQRVMFTEDLKLPESFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGIMCGDGCNGG 153          
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.792e-21
Identity = 57/115 (49.57%), Postives = 67/115 (58.26%), Query Frame = 1
Query:   52 NFHNYTVGQFKHLLGVKPTPKGLLLGVPVKTH----DKSLKLPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHFGMNLSLSVN--DLLTCSGFLSEDG*DGG 378
            NF+N  V   K L G         LG P         + LKLP+SFDAR  WPQC TI  I  QG CGSCWAFGA EA+SDR CIH   ++S+ V+  DLLTC G +  DG +GG
Sbjct:   46 NFYNVDVSYLKKLCGT-------FLGGPKPPQRVMFTEDLKLPESFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGG 153          
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.394e-20
Identity = 56/115 (48.70%), Postives = 66/115 (57.39%), Query Frame = 1
Query:   52 NFHNYTVGQFKHLLGVKPTPKGLLLGVPVKTH----DKSLKLPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHFGMNLSLSVN--DLLTCSGFLSEDG*DGG 378
            NF+N  +   K L G         LG P         + LKLP SFDAR  WPQC TI  I  QG CGSCWAFGA EA+SDR CIH   ++S+ V+  DLLTC G +  DG +GG
Sbjct:   46 NFYNVDMSYLKRLCGT-------FLGGPKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGG 153          
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 52/115 (45.22%), Postives = 64/115 (55.65%), Query Frame = 1
Query:   52 NFHNYTVGQFKHLLGVKPTPKGLLLGVPVKTH----DKSLKLPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHFG--MNLSLSVNDLLTCSGFLSEDG*DGG 378
            NF+N  +   K L G        +LG P         + + LP+SFDAR  W  C TI+ I  QG CGSCWAFGA EA+SDR CIH    +N+ +S  DLLTC G    DG +GG
Sbjct:   46 NFYNVDISYLKKLCGT-------VLGGPNLPERVGFSEDINLPESFDAREQWSNCPTIAQIRDQGSCGSCWAFGAVEAMSDRICIHTNGRVNVEVSAEDLLTCCGIQCGDGCNGG 153          
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 92.8189 bits (229), Expect = 2.907e-18
Identity = 52/114 (45.61%), Postives = 64/114 (56.14%), Query Frame = 1
Query:   52 NFHNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDK---SLKLPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHFG--MNLSLSVNDLLTCSGFLSEDG*DGG 378
            NF+N  +   K L G       +L G  +   D     + LP+SFDAR  WP C TI  I  QG CGSCWAFGA EA+SDR CIH    +N+ +S  D+LTC G    DG +GG
Sbjct:   46 NFYNVDLSYVKKLCGA------ILGGPKLPQRDAFAADVVLPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSNGRVNVEVSAEDMLTCCGGECGDGCNGG 153          
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.797e-18
Identity = 51/115 (44.35%), Postives = 63/115 (54.78%), Query Frame = 1
Query:   52 NFHNYTVGQFKHLLGVKPTPKGLLLGVPVK----THDKSLKLPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHFG--MNLSLSVNDLLTCSGFLSEDG*DGG 378
            NF+N  +   K L G        +LG P         + + LP++FDAR  W  C TI  I  QG CGSCWAFGA EA+SDR CIH    +N+ +S  DLLTC G    DG +GG
Sbjct:   46 NFYNVDISYLKKLCGT-------VLGGPKLPGRVAFGEDIDLPETFDAREQWSNCPTIGQIRDQGSCGSCWAFGAVEAISDRTCIHTNGRVNVEVSAEDLLTCCGIQCGDGCNGG 153          
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.959e-18
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1
Query:   55 FHNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDK-SLKLPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHFGMNLSLSVNDLLTCSGFLSEDG*DGG 378
            F N  VGQ   LLG K +P    L   +K++D   +++P SF+A++ WP CTTIS I  Q  CGSCWAFGA E+ +DR CIH   N+ LS  D++TC    +++G +GG
Sbjct:   47 FDNIKVGQ---LLGFKRSPNRPKL--QIKSYDPLGVQIPTSFNAQTNWPNCTTISQIQNQARCGSCWAFGATESATDRLCIHNNENVQLSFMDMVTCDE--TDNGCEGG 148          
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.392e-18
Identity = 51/115 (44.35%), Postives = 62/115 (53.91%), Query Frame = 1
Query:   52 NFHNYTVGQFKHLLGVKPTPKGLLLGVPVKTHD----KSLKLPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHFGMNLSLSVN--DLLTCSGFLSEDG*DGG 378
            NFHN  +   K L G         LG P         + + LP +FD R  WP C TIS I  QG CGSCWAFGA EA+SDR C+H    +S+ V+  DLL+C GF    G +GG
Sbjct:   46 NFHNTDMSYVKKLCGT-------FLGGPKAPERVDFAEDMDLPDTFDTRKQWPNCPTISEIRDQGSCGSCWAFGAVEAISDRICVHTNAKVSVEVSAEDLLSCCGFECGMGCNGG 153          

HSP 2 Score: 21.1718 bits (43), Expect = 9.392e-18
Identity = 7/16 (43.75%), Postives = 9/16 (56.25%), Query Frame = 2
Query:  374 GVYPISAWGYFVSRNI 421
            G YP  AW Y+  R +
Sbjct:  152 GGYPSGAWRYWTERGL 167          
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.461e-17
Identity = 52/115 (45.22%), Postives = 61/115 (53.04%), Query Frame = 1
Query:   52 NFHNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDKSLK----LPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHFG--MNLSLSVNDLLTCSGFLSEDG*DGG 378
            NF+N  +   K L G         LG P      +      LPKSFDAR  WP C TI  I  QG CGSCWAFGA EA+SDR CI     +N+ +S  D+LTC G    DG +GG
Sbjct:   46 NFYNVDLSYVKKLCGT-------FLGGPKLPQRAAFAADMILPKSFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIRSNGRVNVEVSAEDMLTCCGDECGDGCNGG 153          
BLAST of EY679237 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.062e-16
Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 1
Query:  136 VKTHDKSLKLPKSFDARSAWPQCTTISMILYQGHCGSCWAFGADEALSDRFCIHF--GMNLSLSVNDLLTCSGFLSEDG*DGG 378
            V  HD ++++P  FD+R  WP C +IS I  Q  CGSCWAFGA EA++DR CI    G +  LS  DL++C      DG  GG
Sbjct:   81 VDHHDLNVEIPSQFDSRKKWPHCKSISQIRDQSRCGSCWAFGAVEAMTDRICIQSGGGQSAELSALDLISCCKDCG-DGCQGG 162          

HSP 2 Score: 24.2534 bits (51), Expect = 8.062e-16
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:    6 MNENPIAGWKAA*NPQFSQL 65
            +NE+P AGWKA  + +F  L
Sbjct:   38 INEHPDAGWKADKSDRFHSL 57          

HSP 3 Score: 21.9422 bits (45), Expect = 8.062e-16
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 2
Query:  374 GVYPISAWGYFVSRNIKT 427
            G +P  AW Y+V R I T
Sbjct:  161 GGFPGVAWDYWVKRGIVT 178          
The following BLAST results are available for this feature:
BLAST of EY679237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
CATB_MACFA2.151e-2149.57Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_PONAB4.792e-2149.57Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_HUMAN1.394e-2048.70Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CATB_RAT5.858e-1945.22Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CATB_BOVIN2.907e-1845.61Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]
CATB_MOUSE3.797e-1844.35Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CTSB_DICDI4.959e-1845.87Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]
CATB_CHICK9.392e-1844.35Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
CATB_PIG2.461e-1745.22Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CYSP_SCHJA8.062e-1646.99Cathepsin B-like cysteine proteinase OS=Schistosom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-056-H12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679237 ID=EY679237; Name=EY679237; organism=Citrus sinensis; type=EST; length=919bp
AAAAAATGAATGAGAACCCTATTGCTGGATGGAAAGCTGCCTGAAATCCT
CAATTTTCACAATTACACTGTTGGGCAATTTAAGCACCTTCTTGGAGTCA
AGCCAACACCTAAAGGGCTGCTCTTGGGTGTCCCTGTTAAAACTCATGAC
AAATCCTTGAAGTTGCCTAAAAGCTTTGATGCAAGGTCCGCTTGGCCACA
ATGCACCACCATTAGTATGATCCTATATCAAGGCCATTGTGGTTCTTGTT
GGGCTTTTGGTGCTGATGAAGCGCTATCTGATCGTTTCTGCATCCATTTT
GGCATGAACCTATCACTATCAGTTAATGATCTTTTAACCTGCAGTGGCTT
TTTGAGTGAAGATGGTTGAGACGGGGGTCTATCCAATTTCTGCATGGGGA
TACTTTGTGAGCCGGAATATCAAAACTCCAAAGTGAGTGAAGAAGTGCGA
CAATAAAAAACCACCTTTGGAGGAATTTAAAGAACTACAGAATTTAATGC
ATATAAAATCAATTCTGATCCAAAGGAAATAATGGGGAGAAATTTAACAA
AAAAGAACCTGTTGAATTTTCCTTCACAGTTTAGAAGGATTTTCCTCAAT
AAAAATATGGGGACAAAAAAACAATCAAATGTTATGAATAGGGAGGTCAT
GCTTAAAACCTAATAGTCTGGAAAACTAATGAAAATAGCAAAGAATTATG
GAATATTAAACTAACAATATGAAAAAAAATAAGGGGTGTATAAGGTACCT
TATAAATCAAAAAAAAAAAAAAAGATGAAAGCAATCAAAACAAAAGACAA
GCAGGGATAATATAATCTCTAAAATCATTCCAGAACAACTAACAGTCCGA
AAATGATTTGAAAAATGTTCGCATAATAAGGGACTTTTACGAAGAACAAG
ATGTGGTTAAATAGAAGAA
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